| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3282 |
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| Symbol | paaC |
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| ID | 1046929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3716278 |
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| End bp | 3717795 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637146703 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | NP_745425 |
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| Protein GI | 26990000 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC TCGCAAGCAA TGTGCAGGTG GCGGTGATCG GTGCCGGCGC CATGGGCGCC
GGTATCGCCC AGGTCGCGGC CCAGGCCGGC CACCCCGTCA AGCTCTACGA TAACCGCCCG
GGTGCTGCCG CCCAGGCGGT GACGGGTATC GATCGCCAAC TGGCCCGGCT GGTGGACAAA
GGAAAGTTAC TGGCCGCTGA ACGCGAAACG ATCAATGCCC GCCTGTGCCC GGTCGATACA
CTCGAAGCCT TGGCAGATGC CGGCCTGGTG ATTGAAGCCA TCGTCGAAAA CCTGCAGGTG
AAGCAGGCGC TGTTCAGTCA GCTCGAAACC CTGTGCGCGG CCGACTGTAT CCTTGCCAGC
AATACTTCGT CACTGTCCAT CACCAGCCTC GCCGCTGGCC TTGAACGCCC GCAGCACGTG
GTCGGTATGC ACTTCTTCAA CCCGGCACCG CTGATGGCGC TTGTCGAGGT GGTGTCGGGC
CTGGCAACCG ACCCTGCAGT CGCCGCATGC ATCTACGCCA CTGCCCAGGC CTGGGGCAAG
CAGCCGGTCC ATGCGCGCTC TACACCGGGC TTCATCGTCA ACCGGGTAGC GCGGCCGTTC
TATGCCGAAA GCCTACGCCT GCTGCAGGAA GGTGCCGCCG ATTGCGCCAG CCTGGATGCG
CTGATGCGTG ACTCGGGTGG CTTCCGCATG GGGGCGTTCG AGCTGACCGA CCTGATTGGC
CATGACGTCA ATTACGCTGT CACCTGTTCC GTATTCGATG CTTTCTATGG CGATTTCCGC
TTCCAGCCTT CGCTGGTGCA GAAGGAACTG GTAGACGCCG GTCACCTGGG GCGCAAGACC
GGCCAAGGCT TCTATCGCTA TGCCGAAGGC GTCGAGCGCC CGCAGCCGGC CGAACTGCAC
AGCTCCGCCT GCGCAGAGGC CTGCGTTGTC GAGGGCAACC TGGGGGTGAT GCAGCCGCTG
GTCGAGCGCC TTCGCCAAAG CGGCATTGCC GTGACCCAGC GCGCCGGTAG TGGCCTGATC
CAGGTGGGCG ACGCCACCCT GGCCCTGTCC GACGGCCGCC TGGCCAGCCA ACGTGCCCGT
GAGGACGGGC TGCGCAACCT GGTGCTGCTC GACCTTGCGC TGGACTACAG CAGCGCCACG
CGCATTGCCA TCAGCTGGTC AGCGGATACC AGCGACAGCG CCCGTGACCA GGCCGTAGCC
CTGCTGCAGC GTGCCGGCCT GAAAGTGACC GGTGTCGCCG ACCTGCCCGG CCTGGTGGTA
CTGCGCACCG TGGCAATGCT TGCCAACGAG GCCGCCGATG CGGTGCTTCA GGGCGTCGGC
AGCGCCGCCG ACATCGACCT GGCCATGCGC GCCGGCGTCA ATTACCCCTG CGGCCCGCTG
GCCTGGGCGG CGAACATCGG TATTGCCCAT ACCCTGCGCG TGCTCGACAA CCTGCAGTGC
AGCTATGGCG AGAGCCGCTA CCGCCCTTCC CTGTTGTTAC GCCGCTGTGA AGCCAAAGGA
GGCACCCTAC ATGACTGA
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| Protein sequence | MAALASNVQV AVIGAGAMGA GIAQVAAQAG HPVKLYDNRP GAAAQAVTGI DRQLARLVDK
GKLLAAERET INARLCPVDT LEALADAGLV IEAIVENLQV KQALFSQLET LCAADCILAS
NTSSLSITSL AAGLERPQHV VGMHFFNPAP LMALVEVVSG LATDPAVAAC IYATAQAWGK
QPVHARSTPG FIVNRVARPF YAESLRLLQE GAADCASLDA LMRDSGGFRM GAFELTDLIG
HDVNYAVTCS VFDAFYGDFR FQPSLVQKEL VDAGHLGRKT GQGFYRYAEG VERPQPAELH
SSACAEACVV EGNLGVMQPL VERLRQSGIA VTQRAGSGLI QVGDATLALS DGRLASQRAR
EDGLRNLVLL DLALDYSSAT RIAISWSADT SDSARDQAVA LLQRAGLKVT GVADLPGLVV
LRTVAMLANE AADAVLQGVG SAADIDLAMR AGVNYPCGPL AWAANIGIAH TLRVLDNLQC
SYGESRYRPS LLLRRCEAKG GTLHD
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