Gene PP_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3278 
SymbolpaaA 
ID1046926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3712003 
End bp3712992 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID637146699 
Productphenylacetate-CoA oxygenase subunit PaaA 
Protein accessionNP_745421 
Protein GI26989996 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAC AGCTAGTGGA AACCGGAGTC AAGCGCATCA AGTCGCTGGA AGAGATGTCC 
CCCGAGGAAC GCAACTTCCA GGAAAAGATC GACGCCGAAA TCAAGATCGA AGCCAAGAAC
TGGATGCCCG AGGCCTACCG CCAGACCCTC ATCCGGCAGA TCTCCCAGCA CGCCCACTCT
GAAATCGTCG GCATGCTGCC CGAAGGCAAC TGGGTCACCC GTGCCCCCAG CCTCAAGCGC
AAACTGCAGC TGATGGCCAA GATTCAGGAC GAAGCCGGCC ACGGCCTTTA CCTGTACAGC
GCCATGGAAA CCCTGGGGGC TGACCGCGAC GAAGAAATCG CCAAACTGCA CAGCGGCAAG
GCCAAGTACT CGAGCATCTT CAACTACCCC ACCCTCAGCT GGGCCGACAT GGGCGCTGTG
GGCTGGCTGG TGGACGGCGC CGCCATCGTC AACCAGGTGG TACTGCAGCG CACCTCTTAC
GGCCCCTACT CCCGCGCGAT GATCCGTATC TGCAAGGAAG AGAGCTTCCA CCAGCGCCAG
GGCTACGAAA TGCTCCTGAC CATGATGCGC CAGGGCACCC AAGCCCAGCG CGACATGGTT
CAGGACGCCA TCAACCGCCT GTGGTGGCCG GCGCTGATGA TGTTCGGCCC GAGCGATGAA
CACTCGCCCA ACAGCGCCCA GTCGATGGCC TGGAAGATCA AACGCCAGAC CAACGACGAA
CTGCGCCAGC GCTTCATCGA CCAGACCGTG CCGCAGCTGG AACTGCTTGG CTGCACTGCG
CCTGACCCTG AGCTGAAGTG GAACGCCGAG CGCGGCCACT ACGACTTTGG CGAAATCCAG
TGGGACGAGT TCTACGAAGT GATCAAGGGC AATGGCCCAT GCAACCTGGA GCGTGTCGCC
ACCCGGCGCA AGGCCATCGA GGACGGCGCC TGGGTACGCG AGGCCGCAGT GGCCTATGCG
CGCAAGCAAC AGAACAAGAA CGCCGCCTGA
 
Protein sequence
MYAQLVETGV KRIKSLEEMS PEERNFQEKI DAEIKIEAKN WMPEAYRQTL IRQISQHAHS 
EIVGMLPEGN WVTRAPSLKR KLQLMAKIQD EAGHGLYLYS AMETLGADRD EEIAKLHSGK
AKYSSIFNYP TLSWADMGAV GWLVDGAAIV NQVVLQRTSY GPYSRAMIRI CKEESFHQRQ
GYEMLLTMMR QGTQAQRDMV QDAINRLWWP ALMMFGPSDE HSPNSAQSMA WKIKRQTNDE
LRQRFIDQTV PQLELLGCTA PDPELKWNAE RGHYDFGEIQ WDEFYEVIKG NGPCNLERVA
TRRKAIEDGA WVREAAVAYA RKQQNKNAA