Gene PP_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3228 
Symbol 
ID1046877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3664108 
End bp3665073 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID637146649 
Productperiplasmic aliphatic sulfonate-binding protein, putative 
Protein accessionNP_745371 
Protein GI26989946 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.579009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC GAACGAAGCT GCTGACCGTT GCCGTTGCCC TGCTGCTGGC CGGTCATGCC 
AGCGCCAGCG AGCGCCTGAC CCTGCGCATC GGCGACCAGA AGGGTAACAT GCGCGCCCAG
CTGGAGGCCG CCGACGCCCT GCGCGACCTG CCCTACGACA TCCGCTGGGC CGAGTTCCCT
GCCGCCGCGC CGCTGGCCGA GGCGCTCAAC GCTGGGGCGA TCGATGCCGG CATCATCGGC
GATGCGCCAC TGCTGTTCGT GCTGGCCTCC GGAGCACCGG TCAAGGCCAT CGCAGTGGAC
AAGTCCGACC CTTATGGCAC GGCGTTGCTG GTGCGGCCGG AGGCGCCGCT GCGCAGTGCG
GCCGAACTCA AGGGCAAGCG CATCGCGACC GGGCGAGGGT CGATCGGGCA CCACCTGGCG
CTCAAGGCGC TGGCCCAGGC AGGGCTGACC GAGAAGGATG TGGAGTTCCG TTTCCTTGGG
CCGGTGGACG CCAAGATCGC CCTGGCCAAC GGCTCGGTGG ATGCCTGGTC GACCTGGGAG
CCTTACACAG CGCTGGCCGA GTTGAGTGGG CAAGGCCGTG TGTTGGTCAA CGGTCGTGGC
CTGTCCACCG GCAACAGTTT CCTTGCCGCC ACCGACAAGG CGTTGGAGGA GCCTGGGCGT
CGTGCAGCGC TGCAGGACTA TCTCAACCGC CTGGCCGCAG CGCAGGTGTG GGCCAACCAA
CACCTGGATA CCTACTCGAA AACCTTGGCC GCGATCATTG GCTTCCCGGT AGAGGCGGCC
CGCCTGCAAT TCGAGCGTCG GCAGCTGCGC TGGCAGGTGA TCGACACGCA AACCGTGACC
GAGCAGCAGG ACACCGCCGA CTTCTACCAC ACCCACGGCC TGATGACCGA GCGCCTTGAT
GTGGCCCCGA CCTTTGCCAC CGGCTTCACC CTTCCCGCCG CCGCCAAGCT TGCAGCGCAA
CCCTGA
 
Protein sequence
MSIRTKLLTV AVALLLAGHA SASERLTLRI GDQKGNMRAQ LEAADALRDL PYDIRWAEFP 
AAAPLAEALN AGAIDAGIIG DAPLLFVLAS GAPVKAIAVD KSDPYGTALL VRPEAPLRSA
AELKGKRIAT GRGSIGHHLA LKALAQAGLT EKDVEFRFLG PVDAKIALAN GSVDAWSTWE
PYTALAELSG QGRVLVNGRG LSTGNSFLAA TDKALEEPGR RAALQDYLNR LAAAQVWANQ
HLDTYSKTLA AIIGFPVEAA RLQFERRQLR WQVIDTQTVT EQQDTADFYH THGLMTERLD
VAPTFATGFT LPAAAKLAAQ P