| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3168 |
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| Symbol | benF |
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| ID | 1046814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3589477 |
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| End bp | 3590727 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637146590 |
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| Product | benzoate-specific porin |
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| Protein accession | NP_745312 |
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| Protein GI | 26989887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.143323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.69398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCACA CCCCTTGCGT TGCCCTGGGC CTGACACTGC TCAGCCAGCC ACTGCTGGCT
GCCGAAGGCG GCTTCTTCGA GGACTCGAAG GCCACCCTGA GTGCCCGTAA CTACTACTTC
AGCCGCGATT TTTCCGACAT TGTCGGGGCC AACAAACAGT CCAAGGCCGA GGAGTGGGCC
CAGGGTTTCA TCCTCGACTT CAAAAGTGGC TACACCCCGG GCCCGGTCGG TTTTGGCGTG
GACGCTCTGG GCTTGCTGGG CATCAAGCTG GACAGCAGTC CAGACCGCAC CAACACCGGC
CTGTTGCCGG TGCATGGCGA CGGCCGCGCT GCCGACGAGT ACAGCCGCCT GGCGCCGACC
TTCAAGGCGC GGTTATCAAA AACCGAACTG CGTGCAGGTG AACTGCAACC GAACCTGCCG
GTGCTGACCT TCAGTGATAT TCGCCTGTTG CCACCCACCT ATCAGGGCGT GAGTTTGAGC
TCGTCGGAAA TCGACGGGCT GACTATGCAG GCCGGGCACT TGAAAAGCAC CCACCTGCGT
AACGAAGGTG GCGATGGCAA GATGAACGCG ATGCTCGGCC ATGTGCCGAT GCGACAGGCC
GAAAGCGACG CGTTCAACTA TGTGGGTGGG GACTATGCGT TCAATGCCAA CCAAAGCAGC
GTCAGCCTTT GGTACGGTCA GCTGGAGGAC ATCTACCAAC AAGGCTTTGT TGGCCTGAAG
CACAGCAAAC CCGTCGGCGA CTGGGTACTC AGTGCCAACC TGGGTTATTT CACCGCGCGT
GAGCAAGGCG ATGCGCTGCT GGGCAACATC GACAACCAGG CGTTCTTCTC GCTGTTCACT
GCCCGGCATG GCGGGCACAG CTTCCATGCC GGCTACCAGG GCATTTATGG CGATAGCCCG
TTCCCACGGG TATTTGCCAA CATCTCGCCG TTGGGCAACG AGGTGCCGAC CTATGAGTTT
GCCTACACCG ACGAACGCTC GTACCAGGTA CGTTACGACT ACAACTTCGC CGCCATGGGC
GTGCCGGGCC TGACAGCGAC CGTGCGCTAC ATAACCGGTA ACAATGTCGA TACCGGGCTG
GGTTACGAGG GGCGTGATCG AGAGCGTGAT CTGGATATCG GCTATGCGGT GCAGAGCGGG
GCACTGAAAG GGTTGGGGAT ACGGGTGAGG AACGCCATGG CGCGCTCCAA CTACCGCAGT
GATATCGACG AGAACCGCCT GACGCTGGTG TACACCTGGC AGCTGTTCTG A
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| Protein sequence | MNHTPCVALG LTLLSQPLLA AEGGFFEDSK ATLSARNYYF SRDFSDIVGA NKQSKAEEWA
QGFILDFKSG YTPGPVGFGV DALGLLGIKL DSSPDRTNTG LLPVHGDGRA ADEYSRLAPT
FKARLSKTEL RAGELQPNLP VLTFSDIRLL PPTYQGVSLS SSEIDGLTMQ AGHLKSTHLR
NEGGDGKMNA MLGHVPMRQA ESDAFNYVGG DYAFNANQSS VSLWYGQLED IYQQGFVGLK
HSKPVGDWVL SANLGYFTAR EQGDALLGNI DNQAFFSLFT ARHGGHSFHA GYQGIYGDSP
FPRVFANISP LGNEVPTYEF AYTDERSYQV RYDYNFAAMG VPGLTATVRY ITGNNVDTGL
GYEGRDRERD LDIGYAVQSG ALKGLGIRVR NAMARSNYRS DIDENRLTLV YTWQLF
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