Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3077 |
Symbol | |
ID | 1043775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3461371 |
End bp | 3462429 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146499 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | NP_745221 |
Protein GI | 26989796 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.837168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTT ATATCCTGCG CCGTCTGTTG CTGATCATCC CGACGCTGCT GGCAATCCTG CTGGTCAATT TCGCCATCGT CCAGGCCGCG CCGGGTGGCC CGGTGGAACA AGCCGTGGCG CGCCTGCAGG GCCTCGGTGG CGGCGCACCC GGCGCGCGAG CCGAAGTGGT CCATGGCGAA TCCCGGGCCA CACGCGGCCT GGACCCGAAA CTGATCGAAG AAATCAAGCG CCAGTATGGC TTCGACAAAT CCGCCCCCGA GCGGCTTTGG TTGATGCTCG GCCAATATGC CCGGCTGGAC TTTGGCAACA GCTTCTTCCG CGGCGCCAAA GTCACCGACC TGATTCTCGA CAAGTTGCCG GTCACCCTGT CGCTGGGCTT CTGGGCCACG CTGATCACCT ACCTGGTGTC TATCCCGCTG GGCATCCGCA AGGCGATGCG CCACGGCAGC CGCTTCGATG CCTGGAGCAG CGCGTTGATC GTGATCGGTT ACGCCCTGCC TTCGTTCCTG TTCGCCCTGC TGCTGATCGT CCTGTTTGCC GGCGGCACTT CGCTCAACTG GTTCCCGGTG CGCGGCCTGG TCTCGGACAA TTTCGACGAG CTCAGCCTGC TGGGCAAGGT CGCCGACTAC TTCTGGCACC TGGTGCTGCC GGTTGCGGCC CTGGTGATCG GTGGGTTCGC CACCCTCACG CTGTTGACCA AGAATGCCTT CCTCGACGAG GTTTCCCGCC AATACGTGGT CACTGCCCGG GCCAAGGGCC TCAGCGAACG CCGCGTGCTG TATGGCCATG TGTTGCGCAA CGCCATGCTG CTGGTGGTGG CCGGGCTGCC ACAGGCGCTG ATCACCGTGT TCTTTGCCGG CTCGTTGCTG ATCGAGGTGA TCTTCTCGCT CGATGGCCTG GGCCGCATGA GCTATGAGGC CGCCGTGTCG CGGGATTACC CAGTGGTGTT CGGCACGCTG TTCATCTTTA CCCTGGCGGG CCTGCTGATT CGCCTGATCG GTGACCTGTC TTACACCCTG CTCGACCCGC GCATCGACTT CGATACGAGG GCGCACTGA
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Protein sequence | MTAYILRRLL LIIPTLLAIL LVNFAIVQAA PGGPVEQAVA RLQGLGGGAP GARAEVVHGE SRATRGLDPK LIEEIKRQYG FDKSAPERLW LMLGQYARLD FGNSFFRGAK VTDLILDKLP VTLSLGFWAT LITYLVSIPL GIRKAMRHGS RFDAWSSALI VIGYALPSFL FALLLIVLFA GGTSLNWFPV RGLVSDNFDE LSLLGKVADY FWHLVLPVAA LVIGGFATLT LLTKNAFLDE VSRQYVVTAR AKGLSERRVL YGHVLRNAML LVVAGLPQAL ITVFFAGSLL IEVIFSLDGL GRMSYEAAVS RDYPVVFGTL FIFTLAGLLI RLIGDLSYTL LDPRIDFDTR AH
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