Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3055 |
Symbol | gpI |
ID | 1043377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3436063 |
End bp | 3436875 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146477 |
Product | pyocin R2_PP, tail formation protein |
Protein accession | NP_745199 |
Protein GI | 26989774 |
COG category | [R] General function prediction only |
COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.172022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TACCGCACAA CGCCACCCAG TTGGAGCGCG CCCTGGAGGC GGCCGCCGAC CTTGGCCTTG ACCCGGACAT TATCCGGGGC GTGGCCGACT CGTCACGCTG CCCGCCGAAC TTCCTGCCCT GGCTGGCCTG GGCATGGAAG GTCGAGGGCT GGGAGGCGGC TTACACCGAC GACCAGCGCC GCGCGCTGAT CCGCGAGGCC ATTCCGGTTC ACAAGACCAA GGGCACGGTC GGCGCGATTC GGCGGGTGCT CAAGGCGGTT CGGGTCAACG CGGATTACAA GGAATGGCGC GAGATACCCA ACGCGGCGCC GTACACGTTC CAGGTCACGG CTTGGGCCAA CGAGAACCGG CCGGGTGAAG GCTCGATCAT TTCTCCGCAG CTGGAGGAGC GCTTGCGCGC CCTGGTCGAT GCGACGAAGA ACGAGCGCAG CCACTACACC TTCCGGCTCG GTGCCCGGTT CGACGACGGC CTGGTGGCTA CCGGAGCCAG TCAGGGCCAG CTGCTGCACC GCAAGACGGT GGAGCCTGCG CCCGTTCCGG TTGACCCCTC GGCGCAGGCC CTGCAGTTCG CCAACGCCAC CCAGGCGCGG GGGCTGCACC GGCAGACGAT GGAATCGCCG ATGGTGCCTA TTCCGCTTTC TGAGCAGACG CTGCAGGTGG CCAGCGTTAC CCATGCGCGC GCTGTGACTC GGGGTTATGC CCAGGCGCAG CCCGTCCCGA TCCATGCAGC GGCCACCGTA TCGGTCGCCA ATGCGCTGCG TACCCGTATC GTCGTGCGGG GTACGATGGA GGCTGTTTTA TGA
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Protein sequence | MSLLPHNATQ LERALEAAAD LGLDPDIIRG VADSSRCPPN FLPWLAWAWK VEGWEAAYTD DQRRALIREA IPVHKTKGTV GAIRRVLKAV RVNADYKEWR EIPNAAPYTF QVTAWANENR PGEGSIISPQ LEERLRALVD ATKNERSHYT FRLGARFDDG LVATGASQGQ LLHRKTVEPA PVPVDPSAQA LQFANATQAR GLHRQTMESP MVPIPLSEQT LQVASVTHAR AVTRGYAQAQ PVPIHAAATV SVANALRTRI VVRGTMEAVL
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