Gene PP_3051 details

Gene Information

• Locus tag: PP_3051
• Symbol: gpV
• ID: 1043395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 3433846
• End bp: 3434448
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637146473
• Product: pyocin R2_PP
• Protein accession: NP_745195
• Protein GI: 26989770
• COG category: [R] General function prediction only
• COG ID: [COG4540] Phage P2 baseplate assembly protein gpV
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.271158
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCTACC CGACTGCGCA GCATGACCGG ATGATTTCCG ACCAGGTGAT CAAGGGGTAT 
GTGGTAGCCG TGGACTTGAT GGCCGGGAGG CTGCGCATGA CGGACGGCAG CGACTGGGTC 
AGTGCATGGG TGAAGTGGCA TGCACTGGCT GCCGGCAAGG CCCGCCATTG GCGGTCGCCA 
AGCCTGGGCG AGCAGGGCGC GCTGATCAGC CCGAGCGGTG ACCCTGCCCA GGGCACATTT 
GTGCCGGGGC TGTACGGCAA TGCCGGCCCG CAGCCGGACA ACCGCGACCA TGTCGAGGTG 
TGGCGATTCG ATGATGGCGG CTCACTGGTC TACGACTGGG AAGCCAATAG CTACACCATC 
AAGCTGCCCA CGGGCACGGT CACCATTGAG GTCGGTGGTA GCAAGGCAGT CATCACTGAC 
GACACGATCA GCGCCAAGAC CACGACGATG ACAACCGAGG CGCAGGCCGC CACGGTCAAG 
GCGCCGTCGA TCACCCTGGA GGGTAACGTG CTGATCAAGG GCGCGTTACG CGTAACGGGC 
GATATCAACG GCGGCGGGAT GATCATCGAC ACCGCCGGTA ACACGGCAAA TCACAAGCAC 
TGA 

 

Protein sequence

MSYPTAQHDR MISDQVIKGY VVAVDLMAGR LRMTDGSDWV SAWVKWHALA AGKARHWRSP 
SLGEQGALIS PSGDPAQGTF VPGLYGNAGP QPDNRDHVEV WRFDDGGSLV YDWEANSYTI 
KLPTGTVTIE VGGSKAVITD DTISAKTTTM TTEAQAATVK APSITLEGNV LIKGALRVTG 
DINGGGMIID TAGNTANHKH