| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3038 |
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| Symbol | |
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| ID | 1043338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3421840 |
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| End bp | 3424050 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637146460 |
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| Product | TraC domain-containing protein |
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| Protein accession | NP_745182 |
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| Protein GI | 26989757 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria
[COG5545] Predicted P-loop ATPase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.35161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATA AGGTTCTTGA CCAGTTGCAT GACTACGGCC TGCATCCTGA CCAGCCTTTG
GTCTTCGGCA AGCTGACCCG CTGCCGCACC AAGGATGACA AGGGCAAGGA AAAGAACGGT
TGGTATGTCC TGCATGAGCA TCTGGCCGAG AAGGGACAAA CCCTGATCTT CGGAAGCTTT
GGCGATTGGC GCCTGGGCGA AACGCAGAAG GTGAAGACCG ACGGCCGAGG GCTGACCCCC
GACGAGCGTG AAGTGATGCG CGCCCGGCAG GCTGACGCCA AACGGCGTGC TGCAGAGATC
GCCGCGAACG CTGCACGCCG TGCGGCCAAG CGTGCGGAAG CGCTGTTCAA GCGTATGCCC
GAAAAGGGGC GTAGCGCCTA CCTGGATCGA AAGCAGGTTG TCGGTTTCGG CGTCCGCTAT
GCGCCGAAGT CGGGCGCGGT GCTGGTTCCG ATGCAGAATG CTCAGGACGC CATTGTCGGC
CTGCAGGTAA TTTTCCCGGC TGTCCAAGAG GATACGGGGC GGGACAAGTC CTACTGGCCG
CATGGCATGG CCAAGGATGG TGCTTTCCAC ATGATTGGTG GCCATCCTGA GCCCGGTGAG
CCTGTGCTGG TGTGTGAGGG CTACGCCACC GGGGCTAGCC TGCACATGGC GACCTCCCAG
GCGGTGGCCA TCGCCTTCGA TGCGGGCAAC CTGATGGCGG TCGCCAAGCA TATGCGTGAA
CGCTTCCCTG GTCGGTCCAT CATCATATGC CGCGATGACG ACTGGAAGAC CAAGCGGCCG
ACGGGCGAAC CCTGGAATCC TGGTGAGGAA AAGGCCAACA ATGCTGCGGT GGTTGTGGGT
GGCCAGGTAG TCGGCCCGAT CTTCTCGGCT GAGCGTGAGG TTAAATGGAC CGACTTCAAC
GACCTGCATT GCGCTGAAGG CCTTGAGGCC GTTCGCCGGC AAGTCACGGC AGTGATCAAG
CCACCGGCTA CCGGTGGCTG GAAGGACATG CTGGCCAGGA CTGAGAGTGG TGCCCTGATC
GCCCATATGC AGAACGTCGA ACTGATCCTG GCCAATGATG AGCGCTGGAG CGGGGTGATC
GGTTACAACG CCTTCAGCTC CAAGATCATG CGCCTTCGTG CGGCGCCTTA TGGCGGTGTG
CCGGGGGAGT GGAGCGACAT CGACGACATG CGCGTGATGA AGTGGTTGGC TCAGCAGGGC
CTGCGCGTGA AGGCCTCTCA TGTGGTCGAA GCGGTCAGTG TCGTCGCGCA CGACAACGCG
TTCCATCCGG TATGCACCTA CTTGGCCAGG CTCGAATGGG ATCGTGTGCC GCGCCTGGAG
CGCTGGCTGC ATGAGATCTT CGGTGTCCCC CGGAATGAAT ACAGCTCCAA GGTGGGCAAG
CGCTGGATGA TATCGGCGGT GGCACGGGTG ATGAAGCCCG GCTGTAAAGC GGACGCGGTG
CTGATCCTCG AAGGTGCGCA GGGCGCGGGT AAGTCCTCGG CCTTGGGCGT CCTTGGTGGC
GACTGGTTCA TGGATACACC GTTCACCCTG GGGGACAAGG ACGCGTTCCA AGCCATCCGA
GGTAAGTGGA TCGTCGAGCT GGGCGAATTG GACAGCTTCA ACAAGGCAGA GAGCACCAAG
GCCAAGCAAT TCTTCTCGGC ATCTATCGAC ACTTACCGCG AAAGCTATGG GCGAAGAACG
AGTGACGTGC CACGTCAGTG TGTTTTCGCG GGTACCACCA ACCAGGATGA ATACCTTAAG
GACGCCACCG GTAACCGGCG TTATTGGCCG GTCGCTTGCG TCAAGGTGGA CCTTGAAGCA
TTGCGTCGCG CTCGTGACCA GCTGTGGGCT GAGGCCATGT TCTGCTACCA GGCCGGTGAT
ATCTGGTGGG TGACCCGTGA GGAGGAAGAA CTGTTCACTG CAGAGCAGGA AGAGCGCTTC
GTGGTAGATG AATGGGAGGG GCCGATCCTG AAATGGTTGG AGGAATCCCA GGCCGGCGAG
ACGGTCACCG GAAGCGAAGT GTTGGGGCAG GCATTGAACC TTGACCCTGG CCACTGGGGC
AAGCCTGAGC AGATGCGGGT GGGATCGATC ATGCACCGCC TAGGTTGGCG GCGTCGCAGG
CTGGCTGCGC TGCCGAAGAG CGGTAAGCGC CCTTGGGCAT ATCAGAAGCC TGATGGTTGG
GGGCGCAGCG CCTTGGAGCA GTCCACGCAG CCGAAGGAGG AGTGCTTTTG A
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| Protein sequence | MLDKVLDQLH DYGLHPDQPL VFGKLTRCRT KDDKGKEKNG WYVLHEHLAE KGQTLIFGSF
GDWRLGETQK VKTDGRGLTP DEREVMRARQ ADAKRRAAEI AANAARRAAK RAEALFKRMP
EKGRSAYLDR KQVVGFGVRY APKSGAVLVP MQNAQDAIVG LQVIFPAVQE DTGRDKSYWP
HGMAKDGAFH MIGGHPEPGE PVLVCEGYAT GASLHMATSQ AVAIAFDAGN LMAVAKHMRE
RFPGRSIIIC RDDDWKTKRP TGEPWNPGEE KANNAAVVVG GQVVGPIFSA EREVKWTDFN
DLHCAEGLEA VRRQVTAVIK PPATGGWKDM LARTESGALI AHMQNVELIL ANDERWSGVI
GYNAFSSKIM RLRAAPYGGV PGEWSDIDDM RVMKWLAQQG LRVKASHVVE AVSVVAHDNA
FHPVCTYLAR LEWDRVPRLE RWLHEIFGVP RNEYSSKVGK RWMISAVARV MKPGCKADAV
LILEGAQGAG KSSALGVLGG DWFMDTPFTL GDKDAFQAIR GKWIVELGEL DSFNKAESTK
AKQFFSASID TYRESYGRRT SDVPRQCVFA GTTNQDEYLK DATGNRRYWP VACVKVDLEA
LRRARDQLWA EAMFCYQAGD IWWVTREEEE LFTAEQEERF VVDEWEGPIL KWLEESQAGE
TVTGSEVLGQ ALNLDPGHWG KPEQMRVGSI MHRLGWRRRR LAALPKSGKR PWAYQKPDGW
GRSALEQSTQ PKEECF
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