| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3006 |
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| Symbol | |
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| ID | 1043082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3400018 |
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| End bp | 3400566 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146428 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | NP_745150 |
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| Protein GI | 26989725 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.246764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0211422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACTCGC CGGCCGCCCC CTTCGACTTC CACCGCTGCC TGTTAGCCTG TGCACAGGGT
GACCGACGGG CCCTGCAGGC GCTCTACGAT CACGAAGGCG CGCGCCTGCT GGGCGTTGCC
CGGCGTATCG CACGTGACGA CGCCACCGCA GAAGACATCG TCCACGATGC GATCATCCGC
ATCTGGACCC GCGCAGCCAG CTACGACCCG GCGCGCGGCT CGGCTCGAGG CTGGATCTAC
AGCATTACCC GCCACCTGGC GCTGAATTCG ATACGCGATA CCCGCCGTGA AACTGTACTG
ACCGATGCCG ACACCGAAAC TGCATCAACA TTGCACGGGA GGGTTGATGA CCTTGACCTC
TGGTCCGGCT CAGCAAAGAT TTACCGTTGC CTGGAACAAC TGCAGCCCGC ACCGCAACGC
TGCATCCTGC ACGCCTACGT GGACGGCTGC AGCCACGCCG AGATAGCCGG TTTATTGGGT
GCGCCACTGG GCACCGTCAA GGCCTGGATC AAACGCAGCC TCAAAGCGCT ACGGGAGTGT
CTGGAATGA
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| Protein sequence | MNSPAAPFDF HRCLLACAQG DRRALQALYD HEGARLLGVA RRIARDDATA EDIVHDAIIR
IWTRAASYDP ARGSARGWIY SITRHLALNS IRDTRRETVL TDADTETAST LHGRVDDLDL
WSGSAKIYRC LEQLQPAPQR CILHAYVDGC SHAEIAGLLG APLGTVKAWI KRSLKALREC
LE
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