Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2959 |
Symbol | |
ID | 1042957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3362812 |
End bp | 3363330 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146381 |
Product | alkylhydroperoxidase |
Protein accession | NP_745103 |
Protein GI | 26989678 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0199901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTA TTACCGCTCT CTCGCTGGAC CAGGCGCCTA CTGGCTCGCG CGCAGCTCTC GAAGGCATTC AAAAAGGTCT CGGCTTCATT CCCAACGCAT TCAGGACCCT GGCGCACGCT CCGGTCGCGC TCAATGGTTA CCTGGGCCTC GCCCAAGCGT TGGGTAAAAG CTCACTGAGC GCCGCCGAGC GTGAAGTCGT TGCCCTCGCC ACCTCGGAAA TCAACGGGTG CGACTACTGT CTGGCCGCAC ACACCTTCTT CGGCGGCAAG GCGGGTTTGA GCGATGAGGC CGTAAGCCAA GCCCGAGCCG GCACACTCAG CGCGGTTGCC GCACTGGCGC AGCAGATCAC GGCAAGGCGC GGCCAGTTGA GTGACGAGCA GATCGCTGCC GCGCGTGAGG CAGGGCTTAC TGATAGCAAG ATCGTGGAGG TGGTGGCACA GGTCACGCTG TTAACCCTGA CCAACTACCT GAACAACATC GCCGCTACCG ATATCGACTT TCCGCCATCG GCAAACTAG
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Protein sequence | MTRITALSLD QAPTGSRAAL EGIQKGLGFI PNAFRTLAHA PVALNGYLGL AQALGKSSLS AAEREVVALA TSEINGCDYC LAAHTFFGGK AGLSDEAVSQ ARAGTLSAVA ALAQQITARR GQLSDEQIAA AREAGLTDSK IVEVVAQVTL LTLTNYLNNI AATDIDFPPS AN
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