| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2952 |
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| Symbol | |
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| ID | 1042921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3355954 |
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| End bp | 3356844 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146374 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_745096 |
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| Protein GI | 26989671 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.845125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00814406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCGTC TCGACGACCT GGGTATCTTC GTTCGCAGCG CTGCGCTGGG CAGCTTTACC
GCGGCAGCCC ACGAGGCCGA CCTGCTACCT GGCCAGGCAG CCGAGGCAGT CAAGCGCCTG
GAGCGTGAAC TGGATGTGCG ATTGTTTGCC CGCACCACGC GCAGCTTGCG CCTCACAGCC
GAAGGCGAGC AGTACCTGCC CTCGGCCCTG ATCGCCCTGG AAGCCCTCAG GCACGGGCGC
GACAACCTGC GTCAGGAAAG CGCCCAGCTC AGCGGAACGT TGCAGGTGGC CGCGCCCTCC
GATCTGGGGC GCAACGTGCT GCTGCCCTGG CTCACGGCGT TTCGCCGAGA GCATCCACAG
TTGAACCTGC GCTTGTTTCT CTCCGACCAG ATCGCCGATC TTTTTCGCGA TCCGGTAGAT
ATCGCCATCC GCTATGGCCT GAACGCCGAC GCCAACTATA TAGCCCTGCC ACTGGCACCT
TGGAACCGCA AGGTGCTGGT GGCCTCGCCC GAGTACCTGG CGCGGCAAGG CACCGTCCAA
GCGCCTGGAG ATCTGCTCGA ACACCAGTGC CTGCTGTACA TGCAGCAGGG GCGGGTCTAC
GACAAGTGGC AACTGGGAAC GCAGACCGTC CAAGTGCGTG GCGCCCTGCT CTGCGACGAC
GCCGATATCG CCCGGCGCTG GGCCGTGGCC GGCGAAGGGA TAACCTACAA GTCCTGGCTG
GATGTGAGCG ACGATGTGCT GGCGGGAAGA CTTGTCGTGC TCATGCAGGA TCACCCCGGG
CCCGCCATGC CACTGAGCCT GGTATGCCCG CACCGCAAGC AGCTGTCGCC TGCGGTAAGG
CACCTGCACG CCTGGTTGTC CAGCCGCTTC GCCGAACTGG AGCGCGACTG A
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| Protein sequence | MIRLDDLGIF VRSAALGSFT AAAHEADLLP GQAAEAVKRL ERELDVRLFA RTTRSLRLTA
EGEQYLPSAL IALEALRHGR DNLRQESAQL SGTLQVAAPS DLGRNVLLPW LTAFRREHPQ
LNLRLFLSDQ IADLFRDPVD IAIRYGLNAD ANYIALPLAP WNRKVLVASP EYLARQGTVQ
APGDLLEHQC LLYMQQGRVY DKWQLGTQTV QVRGALLCDD ADIARRWAVA GEGITYKSWL
DVSDDVLAGR LVVLMQDHPG PAMPLSLVCP HRKQLSPAVR HLHAWLSSRF AELERD
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