Gene PP_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2931 
Symbol 
ID1042912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3333098 
End bp3333922 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID637146353 
ProductYheO domain protein 
Protein accessionNP_745075 
Protein GI26989650 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCCGC GTTCGAGGCC ACCGGCTCGC GCCGGATGGT TCCGCCGCGC ACGCCGGCGC 
TCGGCTGAGT CTTACAGGGC CCGCGAAAGC AGATCGCGAA TTTCAACTAT ATGTGTAAAA
ATGCACAAAC AGTTGATTTT GCGGTCTGCC ATGCCTATCC CCCCCAGCGA AGAACGCCAA
CTCACCCTCA CCGTGCTCAA GGCCGCGATC CAGGCACTGG GCAGCGTTGC CGCACGCAAC
ATGGAAATAC TCCTGCACGA CCTTGACCAC CCCGAACACT CGGTGGTGGC GATCGTCAAC
GGGCATCTTT CCGGCCGCAG CGTGGGCAGC CCGATCCTTG CCGCACCGGA GCAGGACCAG
GGTTTCAAGG CACTGATGCA GGCCTCGGCC GACCAGCACG GCCGTGAGCC GGTGGTGCTG
CCCGATTACC CCACTACGCT CAAAGGCCGC ACGCTACGAA GTGCCACGGC AATCTTCCGT
GACAGCAGCG GCCACCCGTT CGCCAGCCTG TGCGTCAACA CCGACGTCAC CGGCCTGGAT
GCTGCCATGA ACTTTCTCCA GCAGCTGCAG CCGCTGGGGG CCATACCTGC GGTCAACGAA
CCTGCCGACA TGGAGCTGCT GATGAGCGAG ATCATCCAGG CCGCCCTGCA GCGCAGCGGC
CAGGGGCGGA TGAACAAACA GGCCAAGGTC GAGGCCGTGC GCGTCATGCA GGAGCGCGGC
CTGTTCATCG TCAAGGGCGG CGTCGAGAAG GCTGCCAGCG CCCTCGGCGT GACGCGCTAC
ACCATTTACA ACTACCTCGA GCAACTACGC GGAGCCAGCC AATGA
 
Protein sequence
MLPRSRPPAR AGWFRRARRR SAESYRARES RSRISTICVK MHKQLILRSA MPIPPSEERQ 
LTLTVLKAAI QALGSVAARN MEILLHDLDH PEHSVVAIVN GHLSGRSVGS PILAAPEQDQ
GFKALMQASA DQHGREPVVL PDYPTTLKGR TLRSATAIFR DSSGHPFASL CVNTDVTGLD
AAMNFLQQLQ PLGAIPAVNE PADMELLMSE IIQAALQRSG QGRMNKQAKV EAVRVMQERG
LFIVKGGVEK AASALGVTRY TIYNYLEQLR GASQ