Gene PP_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2906 
Symbol 
ID1042842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3304776 
End bp3306167 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content62% 
IMG OID637146328 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_745050 
Protein GI26989625 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGC TGAACCCGTC TAAAGGCTGG AGTTCTTCTA CCAGCCGCCT GCTGGCGCTG 
TACAGCTTTC TGTTCGTGGC CTGGAGCAGC ATCCTCATGG GGGTGCTGTA CTTCGAGGTC
TCCAGCTACC TGAACAAACT CACCCGTCAT TCCATGCTGC AGCGCCAGCA CCTGTTCGCC
CACATGAGCG GCAAGCAACT GGACGACGCC CTGATCGCCA GCCAGGCCTT CGAGGAGCGC
AGCTTTGACG CCTACGGCCT GTTCGATAGC CAGCTCAACC CGATTGGCGG CACCGTGCGA
GCCCTGCCCC CAGAGCTCAG ACTGGATGGC AAGATCCATG AGCTGGAACG CTGCCTGGAT
GCCGACGACC CACGCATGCC CCGCGACAGC TGCGACGCGG TGGCAATCAA AGTACAGGAT
GGCCGGTGGC TGGTGCTGGT GCGTGACAAT GGCTCGCTGT TCGTGGTTAC CCGTATCATC
CTGCACGCCC TGCTCTGGGG CATCTCGCTG ACCCTGATCC CGGGTTTTGC CGGTTGGTAC
CTGCTACGGC GCAGGCCGCT CAAGCGTATA CGGGCGATCC AGGCCCAGGC CGAACTGATC
GTCGCCGGCG ACCTGACCCA CCGCCTGCCA CTGTCGGCCC GCCGCGACGA ACTGGACATG
CTTGCGGCGA TCGTCAATGC CATGCTCGAC CGTATCGAAC GGCTGATGCA TGAGGTCAAG
GGCGTGTGCG ACAACATTGC CCATGACCTG CGCACACCGC TGACCCGCCT GCGCGCCCAG
CTGTACCGTA TTCGCCAGCA AAGCGACGTG GATTCTGCGC AAGCCGAAGC GCTGGACCAG
GCCATTGGCG AAACCGACAC CTTGATGGCG CGCTTTCGCG GGTTGTTGCG CATCAGCGAG
CTGGAAGACC GCCAGCGCCG CGCGGGCTTC ATCCAGCTTG ACCCGCATGA GCTGCTGGTA
GAACTGCATG ATTTTTACCT GCCATTGGCC GAGGATGGCG GCATTCAACT GCAATTGCAC
CAACCTGCGC AGCTACCGGC GTTGCACGGC GACCGCGAAC TGCTGTTCGA GGCCTTGGCG
AATCTGGTGG GTAACGCGAT CAAGTTCACG CCCGAGGGTG GTCGGGTGCG CATCACCGCC
ACGCAGGATG ACAGCGGCGT ACACATGGCG ATCGAGGATA GCGGGCCTGG TATTCCCGAA
GCAGAGCGAA CGGCTGTACT GAAACGGTTC TATCGCAGCG ATGAAGGCCA CCGCCATGCC
GGCTTCGGGC TGGGGTTGTC GATCGTGGCG GCGATCGTCG ACCTGCATGG TTTCGGGCTG
GAGATTGGGG GAAGCGAGTT GGGTGGGGCC AGGCTGGTAT TGCACTGCCC GCTTGCGGGT
CTAAGCAAAT AA
 
Protein sequence
MPLLNPSKGW SSSTSRLLAL YSFLFVAWSS ILMGVLYFEV SSYLNKLTRH SMLQRQHLFA 
HMSGKQLDDA LIASQAFEER SFDAYGLFDS QLNPIGGTVR ALPPELRLDG KIHELERCLD
ADDPRMPRDS CDAVAIKVQD GRWLVLVRDN GSLFVVTRII LHALLWGISL TLIPGFAGWY
LLRRRPLKRI RAIQAQAELI VAGDLTHRLP LSARRDELDM LAAIVNAMLD RIERLMHEVK
GVCDNIAHDL RTPLTRLRAQ LYRIRQQSDV DSAQAEALDQ AIGETDTLMA RFRGLLRISE
LEDRQRRAGF IQLDPHELLV ELHDFYLPLA EDGGIQLQLH QPAQLPALHG DRELLFEALA
NLVGNAIKFT PEGGRVRITA TQDDSGVHMA IEDSGPGIPE AERTAVLKRF YRSDEGHRHA
GFGLGLSIVA AIVDLHGFGL EIGGSELGGA RLVLHCPLAG LSK