Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2906 |
Symbol | |
ID | 1042842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3304776 |
End bp | 3306167 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637146328 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_745050 |
Protein GI | 26989625 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.136226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATTGC TGAACCCGTC TAAAGGCTGG AGTTCTTCTA CCAGCCGCCT GCTGGCGCTG TACAGCTTTC TGTTCGTGGC CTGGAGCAGC ATCCTCATGG GGGTGCTGTA CTTCGAGGTC TCCAGCTACC TGAACAAACT CACCCGTCAT TCCATGCTGC AGCGCCAGCA CCTGTTCGCC CACATGAGCG GCAAGCAACT GGACGACGCC CTGATCGCCA GCCAGGCCTT CGAGGAGCGC AGCTTTGACG CCTACGGCCT GTTCGATAGC CAGCTCAACC CGATTGGCGG CACCGTGCGA GCCCTGCCCC CAGAGCTCAG ACTGGATGGC AAGATCCATG AGCTGGAACG CTGCCTGGAT GCCGACGACC CACGCATGCC CCGCGACAGC TGCGACGCGG TGGCAATCAA AGTACAGGAT GGCCGGTGGC TGGTGCTGGT GCGTGACAAT GGCTCGCTGT TCGTGGTTAC CCGTATCATC CTGCACGCCC TGCTCTGGGG CATCTCGCTG ACCCTGATCC CGGGTTTTGC CGGTTGGTAC CTGCTACGGC GCAGGCCGCT CAAGCGTATA CGGGCGATCC AGGCCCAGGC CGAACTGATC GTCGCCGGCG ACCTGACCCA CCGCCTGCCA CTGTCGGCCC GCCGCGACGA ACTGGACATG CTTGCGGCGA TCGTCAATGC CATGCTCGAC CGTATCGAAC GGCTGATGCA TGAGGTCAAG GGCGTGTGCG ACAACATTGC CCATGACCTG CGCACACCGC TGACCCGCCT GCGCGCCCAG CTGTACCGTA TTCGCCAGCA AAGCGACGTG GATTCTGCGC AAGCCGAAGC GCTGGACCAG GCCATTGGCG AAACCGACAC CTTGATGGCG CGCTTTCGCG GGTTGTTGCG CATCAGCGAG CTGGAAGACC GCCAGCGCCG CGCGGGCTTC ATCCAGCTTG ACCCGCATGA GCTGCTGGTA GAACTGCATG ATTTTTACCT GCCATTGGCC GAGGATGGCG GCATTCAACT GCAATTGCAC CAACCTGCGC AGCTACCGGC GTTGCACGGC GACCGCGAAC TGCTGTTCGA GGCCTTGGCG AATCTGGTGG GTAACGCGAT CAAGTTCACG CCCGAGGGTG GTCGGGTGCG CATCACCGCC ACGCAGGATG ACAGCGGCGT ACACATGGCG ATCGAGGATA GCGGGCCTGG TATTCCCGAA GCAGAGCGAA CGGCTGTACT GAAACGGTTC TATCGCAGCG ATGAAGGCCA CCGCCATGCC GGCTTCGGGC TGGGGTTGTC GATCGTGGCG GCGATCGTCG ACCTGCATGG TTTCGGGCTG GAGATTGGGG GAAGCGAGTT GGGTGGGGCC AGGCTGGTAT TGCACTGCCC GCTTGCGGGT CTAAGCAAAT AA
|
Protein sequence | MPLLNPSKGW SSSTSRLLAL YSFLFVAWSS ILMGVLYFEV SSYLNKLTRH SMLQRQHLFA HMSGKQLDDA LIASQAFEER SFDAYGLFDS QLNPIGGTVR ALPPELRLDG KIHELERCLD ADDPRMPRDS CDAVAIKVQD GRWLVLVRDN GSLFVVTRII LHALLWGISL TLIPGFAGWY LLRRRPLKRI RAIQAQAELI VAGDLTHRLP LSARRDELDM LAAIVNAMLD RIERLMHEVK GVCDNIAHDL RTPLTRLRAQ LYRIRQQSDV DSAQAEALDQ AIGETDTLMA RFRGLLRISE LEDRQRRAGF IQLDPHELLV ELHDFYLPLA EDGGIQLQLH QPAQLPALHG DRELLFEALA NLVGNAIKFT PEGGRVRITA TQDDSGVHMA IEDSGPGIPE AERTAVLKRF YRSDEGHRHA GFGLGLSIVA AIVDLHGFGL EIGGSELGGA RLVLHCPLAG LSK
|
| |