Gene PP_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2848 
SymbolureF 
ID1042740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3251158 
End bp3251832 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID637146270 
Producturease accessory protein UreF 
Protein accessionNP_744992 
Protein GI26989567 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG ACCTGGCGCT GCTGCGCCTG CTGCAGTTGG CCAGCCCCGG CTTGCCGGTG 
GGTGGTTTTA CCTATTCGCA AGGCCTGGAG TGGGCGGTCG AGGCCGGCTG GGTTCGGGGC
GTGGACAGTT TTGCCGGCTG GCAGCGTGAG CAGGTTCACG ACACATTGGC CTGCCTCGAC
TGGCCGGTGC TGGCGCGTCT GTACCACGCC TGCCAGGCTA AAGACGCCGA AGCGTTCGGC
CACTGGAGTC GGTTCTTGCT GGCCAACCGC GAAACCGCCG AGCTGCGCCT GGAAGAACAG
CAGCGCGGCG CAGCGCTGGC GCGGTTGCTC GACGGCTGGC AACTGGGCCA GGCACCGGCC
TGGCGCGCCA GCCTTGAGCT GACTCAGTTG GGCGGTATGG CCTGGCTGGC TGCACACTGG
GCCATCCCGC TGCGCCAGCT GGCATTGGGC CATGGCTTTG CCTGGCTGGA GGGCGCGGTC
ATGGCCGGGG TCAAGCTGGT GCCGTTCGGC CAGCAGGCTG CCCAGACCTT GCTGCGCGAC
CTTGGCGCCG ACTTGCCCGC TGCACTGGAC CAGGCGCTAG CCCTGGGCGA TGACCAGCTC
GGCGGCGGCC TGCCGCTGCT GGCCATCGCT TCATCGCGTC ACGAAACCCA ATACACCCGT
TTGTTCCGTT CCTGA
 
Protein sequence
MNSDLALLRL LQLASPGLPV GGFTYSQGLE WAVEAGWVRG VDSFAGWQRE QVHDTLACLD 
WPVLARLYHA CQAKDAEAFG HWSRFLLANR ETAELRLEEQ QRGAALARLL DGWQLGQAPA
WRASLELTQL GGMAWLAAHW AIPLRQLALG HGFAWLEGAV MAGVKLVPFG QQAAQTLLRD
LGADLPAALD QALALGDDQL GGGLPLLAIA SSRHETQYTR LFRS