Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2835 |
Symbol | |
ID | 1042704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3236504 |
End bp | 3237538 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146257 |
Product | Ldh family oxidoreductase |
Protein accession | NP_744979 |
Protein GI | 26989554 |
COG category | [C] Energy production and conversion |
COG ID | [COG2055] Malate/L-lactate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.129302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.973533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGCGC TTACCACGTT TGTCGAGCAA CTGTTCATGA AAGCCGGAGC CGACGTGGAC GTCGCCCAGG TAGTGACCCG GGTGTTGCTA GAAGGCGAGC TGCTCGGCCA CCGTACCCAT GGCCTCAACC TGGTCAGCCG CTACATCGAC GGCATGCTCA GCGGCCAGGT CAAGGCCCGC GCGCAGGCGC TGGAACAGGT CGCCGACAGT GGTGTTTCCA GCCTGTTCGA CGGCCACTAC GTGTTGGGGC CCTATTGCGT CAGCCGGGCA CTGGATTGCG CGGCCGCGGG CGCGATCAAG CAGGGCATCG GTATTGCGGT AGTACGCCGC GCTGCCCATA TCGGCTGCCT GGCCGCCTAC CTCAAGCCAT ACACCGACCA AGGGTTGCTG GCCATCGTCT ACTCGTCGGA TCCGTCGGTG GGGCTGGTCT GTGCTCATGG CGGCATCGAC CCGGTGTTCA CCCCCAACCC GATTGCTGCC GGTATCCCGA CCCAGGGTGA GCCGATCCTG CTGGATGTCA GCATGTCCAC CGTCACCCTC GGCCTGGTCG GCCAATGCCG CGATGCCGGC CGGCGTCTGC CGCACCCTGT GCTGGTGAGC AATGACGGGC AGCTCAGCGA TGACCCGGGC GATTTCTTTA CCCGCCCGCA AGGCAGCATC CTGCCGCTCG GCGGCCAGGC CTTTGGCCAC AAAGGTTTTG CCCTTGCGCT GTTGGTCGAA GCCCTCACCT CGGGGCTGGC CGGCCGTGGG CGCAAGGATG CACCGGATCA GTGGGGCGCC TCGGCCACTG CGCTGGTGAT TGACCCGCGC ATGTTCGGCG GCCTGGAGGC GTTCCTCGAC GAAACCAGCT TCCTGGGGGG ATTGGTTCTG GCAAGCCGCC CGCTAGACCC CGAACGCCCG GTACGCCTGC CCGGGCAAGC AGGCCTTGCC CTGCGTCGAC AGGCCTTGGA GCAGGGCGTG AGCCTTTCGC CGCAGCTGAT AGCCGACCTT GAGCGCGTGG CTGGGCAGTT GCAACTACCG GGACTTTTCC AATGA
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Protein sequence | MQALTTFVEQ LFMKAGADVD VAQVVTRVLL EGELLGHRTH GLNLVSRYID GMLSGQVKAR AQALEQVADS GVSSLFDGHY VLGPYCVSRA LDCAAAGAIK QGIGIAVVRR AAHIGCLAAY LKPYTDQGLL AIVYSSDPSV GLVCAHGGID PVFTPNPIAA GIPTQGEPIL LDVSMSTVTL GLVGQCRDAG RRLPHPVLVS NDGQLSDDPG DFFTRPQGSI LPLGGQAFGH KGFALALLVE ALTSGLAGRG RKDAPDQWGA SATALVIDPR MFGGLEAFLD ETSFLGGLVL ASRPLDPERP VRLPGQAGLA LRRQALEQGV SLSPQLIADL ERVAGQLQLP GLFQ
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