Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2638 |
Symbol | |
ID | 1046028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3019460 |
End bp | 3022978 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146060 |
Product | cellulose synthase subunit BcsC |
Protein accession | NP_744782 |
Protein GI | 26989357 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGAA TGATCGGCGT GTTGATGCTG GCGGCAATAA CCTGCCAGGC AGATGCGCAA CCCAAGGATA TCGATGAACA GCGCCAATGG CTGCTGGACC AGGTACGCCG CGGCGAAGCG CTGCACCGTG ACGACCTGGT GCGCGATGCG CTGGGCCGTT TGCAGTTGCT TGAGCCGCGC AACCCGGACG TGTTGCTGGC GGCCTTGAGC CTGGCATTGC GCGAGAAGAA CAGCAGTGAA GCCGAGCAGT TGAGTGCGCG GATCAGTGCC GTGGCGCCTG GCAGCCTGCA AGCACGTCAG GCCGCACGCC TGCTTGAGCT TCAACAACCG GCGCCTGCAC GGCGCTTGCA GCAGGCGCGT CTGCTGGCAG TTACCGGCCG TAATGAAGAG GCGCTGGCGG TATACGAACA GTTGTTTGCC GGCGAACCAC CCAGCCTTGA ATTGGCCCTG GACTACTGGC GCGTGCGCGG CAATCTGCCA GGCCAACGCC CTGAGGCGAT CCGCCAGTTG CAGCGGTTGG ATCAGCAGTA CCCGGGCAGC GCCGGGCTGC GCCAGACCCT GGCTGGTTGG TTGTTCGCCG AAAAGCGTGA CCGCGAGGCC TTGGCCCTGC TCGATCAGCT GGCGCGAGAC CCTGGTGCAC GGGATGCCGC TGCCCAGCGC GAGTTCGACT ACCTGTCCGG GCAAGCCGTG AGTGCCACCA GCGCGGCAGC CTGGCAAGCC TTTCTTCAGC GTTACCCGGC TTCGCCGTTG CTGGCACAGG CCAGCGAGAC CTTGCAACAG CAGCGCAAGC TGCTGGCCGA CCCGGCATGG CAGGCCGGTC AACGGGGTAA GGCATTGCTC GACAAGGGCC TTAATGCCGA AGCGGAAACG CAGCTGCGCC GCGCACTGCG CCAGTACCCG GGCGATGCCA GCCTGCATGG GGCCCTGGGT TATGCGTTGA TGCGCCAGGG CCGCCATGAA GACGCCCATG CGGCGTTCCG CGCGGCGAGC GCCAAGGAGC AGGACACCTA CTGGATCAGC CAATGGAAGG ACCTGGAGTC GTCCAGCCAG TATTGGGCCC TGCTGAAGAA AGCCGAGCGG GCCCTGGAGG TGAAAGACGT GCGCGGTGCG CGCGCACTTT ACCAGCAGGC TCGCCAGCAA CGGCCAAAGG ATGAATACGC GTTGCTGGGC CTGGCAGATG TCTCGCTGGC CGAGGGCGAT GTGGCGGCTG CCGAGCGGCA GTACCTGCAG GTACGGCGTA TGGCGCCGGA TAACGAAAGT GCCGTGCGTG GCTTGATGCG CGTTTACCAG GCGCAGTCGC CAGGCAAGGC GCAGGCATAC CTGGACAGCC TGCCACCACG GCAGCAGGCG CAGTTCGCCA GCCTGCGACG CAGCCTGGAA CTTGCGCGGC TGCGCCAGCA AGGGGACGAA GCCCTGCAGC GCGAGGACTG GTCGACGGCC AGCCACGTGC TGGGCCAGGC TTCGGCCCTG GCCCCCGATG AGCCTTGGCT GGTGTATCAG CTGGCCAACA GTCTGCGTCA CCAAGGGCGC ACTGGCGAGG CCGACGCGGC ATTTGCCAGG CTGGTGCAGC ACCAGCCACG TGATCCGGCA ACGCGCTATG CCAACGGCCT GTTCCTGGAG TCCAGCGACC GTGATGCCTT GGCTCTGGAA AGTCTGAGGG CGGTACCTCA GGCGACCTGG AGCGCGGACA TGCACGCGCT GGAACAGCGT GTTCAGCGGC GTATGACCCT GGCCTCTGCG CAGCAGTTGC AGGCACAAGG CCGCAGTGCC GAGGCGACAG CCTTGCTTGA AGCCGGCCTG GCGCGTGGTG AAGGTAGCCC GGACGACTTG ATGCTGTTGG CTGACTGGGC AGCAGCGCGT GGTGAACATG GCAAGGCGCG CAGCTATTAC CAGCGTGTAC TGGTCGTGCA GCCTGGGCGC CCTGATGCAC GCCTTGGGGT GATGGAAAGC GCCGTGGCCG AAGGCAACCT GCAGCAGGCC CGGCACATGC TGGGCGTGAA GGTGCCACAA TTTGCCGCTG ATGACGGCAA CGCCCAGCGG CGCCTGGCGG CGGTGTGGAC CGCGCTGGGT GAACACGATC AGGCGGCCAG GCTGCTTGAC CGGATTGCCG CGCAGCAGAC GCGACCCGAT CCGTTGTTGC GGCGCGACGC AGCCCGCCTG GTAGCGCAGG ATGATCCTCA ACGAGCACTG GACCTTTACG CGGCAGCGAT GGCCGATGCG CAGTTGCTGG ACCGTGCTGC CGTAGCGCCA CGGGATGACC GTGCATTGAC CCTGGCCAGC CGCGAGCAGG ATGGCGACGA CTGGCTGGCC CGCAGCCTGC GCAGTGATGT GGATGCCCTG TATCGCCAGC GCAATACCCA TGTGACGCTG ATGCATGACT ACGGCTGGCG CGAGGATGAC GGTACGCCCG GTACTTCGGA ACTGAGTACC CAGTCGACCT TGTTGCATGT CGACACCCCT TGGCAGGAGG GCACCGCGTT TGCGCGAGTA GAGCGCATTG GCATGGATGC GGGGTCGTTC GAGCCGAACG ATCAGGGAAG CTACACCCCC GACTTCGGCA GCTGCCAGTT TGTTGGCCAG ACCGCTGACG GCAAAACACT GCCCGCGTGC ACGGGGGGAT CGCAGACTGC AAACGGCAGC CTGTTGGCGT TGGGTTGGCA GGGCAGCCGC TGGGCGTTCG ACCTGGGCAC CACCCAGGGC TATGCAATCA ACAACTGGCT GGGCGGCGCA ACGGTCAACG GTGACCTCGG GCAGGTTGGC TGGTCGCTGA CCGCCTCGCG CCGGCCGATG AGCAATTCAT TGCTGTCGTT CGCCGGCGCA CGCGACCGCC CGACGGGCGT GCGCTGGGGC GGGGTCACTG CCAATGGCGC CACGCTCGGC CTGAGCTGGG ACCAAGGTGG CGACAACGGG GTGTGGGCCA GCCTGGGGCA CCATTGGCTG TACGGCGAAA ACGTGGCCGA CAACCAGCGG ACCCGGGCCA TGGCCGGCTT TTACCACCGC GTGGTGGAAA AGGCCGACGA GCGTGTACGT GTTGGCGTGA CGCTGATGCA CTGGCGCCAT GACAAGGACC TGGGCGGCTA CAGCCTGGGG CAGGGCGGTT ACTACAGCCC GCAGCGCTAC AGTTCGGTGG GCGTGCCGGT CAGTTATGCC TGGCGCAACT ACGACTGGTC GCTGCTGCTG GAAGGTTCCG TCAGCTGGTC TCAGGCTCAT AGTGGCAGTA GCCGCTTGTA CCCGGACGCG CACATCAACC GCAAGGTACT GGCGAATTAT GGCGTCGACT CCAACATCGA TGCGATGACC GAAGCCAGCG ACAGCAGCGG GTTGGGCTAC CGCCTGCGCG GTCTGTTCGA ACGGCGCCTA AGTGACCAGT GGGTACTGGG CGGCGGCTTC GACTGGCAGC ATAGCGATGA CTATGCGCCT AGCCATGGCA TGCTCTACCT GCGCTACCTG TTCGAACCGT GGCGAGGCAA CCTAGCCCTG CCGGTGACAC CGCTGGAGCC TTCCAGCGAG TGGCGGTGA
|
Protein sequence | MQRMIGVLML AAITCQADAQ PKDIDEQRQW LLDQVRRGEA LHRDDLVRDA LGRLQLLEPR NPDVLLAALS LALREKNSSE AEQLSARISA VAPGSLQARQ AARLLELQQP APARRLQQAR LLAVTGRNEE ALAVYEQLFA GEPPSLELAL DYWRVRGNLP GQRPEAIRQL QRLDQQYPGS AGLRQTLAGW LFAEKRDREA LALLDQLARD PGARDAAAQR EFDYLSGQAV SATSAAAWQA FLQRYPASPL LAQASETLQQ QRKLLADPAW QAGQRGKALL DKGLNAEAET QLRRALRQYP GDASLHGALG YALMRQGRHE DAHAAFRAAS AKEQDTYWIS QWKDLESSSQ YWALLKKAER ALEVKDVRGA RALYQQARQQ RPKDEYALLG LADVSLAEGD VAAAERQYLQ VRRMAPDNES AVRGLMRVYQ AQSPGKAQAY LDSLPPRQQA QFASLRRSLE LARLRQQGDE ALQREDWSTA SHVLGQASAL APDEPWLVYQ LANSLRHQGR TGEADAAFAR LVQHQPRDPA TRYANGLFLE SSDRDALALE SLRAVPQATW SADMHALEQR VQRRMTLASA QQLQAQGRSA EATALLEAGL ARGEGSPDDL MLLADWAAAR GEHGKARSYY QRVLVVQPGR PDARLGVMES AVAEGNLQQA RHMLGVKVPQ FAADDGNAQR RLAAVWTALG EHDQAARLLD RIAAQQTRPD PLLRRDAARL VAQDDPQRAL DLYAAAMADA QLLDRAAVAP RDDRALTLAS REQDGDDWLA RSLRSDVDAL YRQRNTHVTL MHDYGWREDD GTPGTSELST QSTLLHVDTP WQEGTAFARV ERIGMDAGSF EPNDQGSYTP DFGSCQFVGQ TADGKTLPAC TGGSQTANGS LLALGWQGSR WAFDLGTTQG YAINNWLGGA TVNGDLGQVG WSLTASRRPM SNSLLSFAGA RDRPTGVRWG GVTANGATLG LSWDQGGDNG VWASLGHHWL YGENVADNQR TRAMAGFYHR VVEKADERVR VGVTLMHWRH DKDLGGYSLG QGGYYSPQRY SSVGVPVSYA WRNYDWSLLL EGSVSWSQAH SGSSRLYPDA HINRKVLANY GVDSNIDAMT EASDSSGLGY RLRGLFERRL SDQWVLGGGF DWQHSDDYAP SHGMLYLRYL FEPWRGNLAL PVTPLEPSSE WR
|
| |