| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2637 |
|---|
| Symbol | |
|---|
| ID | 1046027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3018360 |
|---|
| End bp | 3019472 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637146059 |
|---|
| Product | endo-1,4-D-glucanase |
|---|
| Protein accession | NP_744781 |
|---|
| Protein GI | 26989356 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.625991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGA TGCTGGTAGG GCTGGTCGCC TTAGGCCTGC CCGTTTTCGC CAATGCCGGG
TCGGTTTGCC CATGGCCTGC CTGGGAGCGG TTCAAGGCCG AGCTGGTGAG TGTGGATGGG
CGGGTCATCG ACCCGAGTGA CGAGCGCCTG ATCACCACCT CGGAAGGGCA GAGTTACGCG
CTGTTCTTCG CCCTGGTAGG TAACGACCGG CAAACCTTCG CGCAGTTGCT GCGTTGGACC
AGCAACAACC TCGCCGAGGG TGACCTGGCC CGGCATCTGC CTGCCTGGCT GTGGGGCCGT
GACGGGCAGC AGCAGTGGCA GGTGCTGGAC GCCAACAACG CCAGCGATGC CGATCTGTGG
ATCGCCTACA GCCTGCTGGA AGCAGGGCGG TTGTGGGACC AGCCGGCCTA CACGCAACTG
GGCCAGCACC TGCTGTGGCG TATCGCCGCG CAGACCGTGC GCAAGCTTCC AGGCCTTGGT
GTGATGTTGC TGCCAGGTGA CTACGGCTTC GAAGACGCCC AGGGTACCCG CCTGAACCCC
AGCTACCTGC CGCTGCAGCT GCTCGACCGC TTCAGCGATG TGGACCCCTT GTGGGGTGAG
CTGGCGGCCA ACACGCGGCG TTTGTGGTTG GCATCGTCGC CAAAGGGTTT TGCCCCGGAC
TGGTTGCTGT GGACGCCGGC CGGAAAGCCA GCGGCAGACA CGAAACATGG CAATGCCGGT
GATTATGACG CCATTCGTGT GTACCTGTGG GTCGGCATGT TGGCCGAGGG GGCGGCGCAA
CGCCGCGAAC TGGTGGCCCA TTATGCGCCG ATGGCGGCAT TGACCCAGCG CCAGGGGCTA
CCTCCTGAGC ACCTGGATGC ACGCAGCGGT GAAGCCCGCG GCCATGGCCC GGCGGGTTTC
TCTGCGGCCT TGCTGCCATT GCTTGCTGCC TCGCCAGAGC ACGTGGCCGG CTTGGCGGCC
CAGCGCCAGC GCTTGCGCGA ACAGCCGGTC GAGGCCAAGG CGTATTACAG CCAGGTGCTG
GCGCTGTTCG GCCAGGGCTT CGACGAGGCC CGTTACCGTT TTGACCCGCA CGGCCGGCTG
TTGCCGGCCT GGAGCGCGCC ATGCAGCGAA TGA
|
|---|
| Protein sequence | MRQMLVGLVA LGLPVFANAG SVCPWPAWER FKAELVSVDG RVIDPSDERL ITTSEGQSYA
LFFALVGNDR QTFAQLLRWT SNNLAEGDLA RHLPAWLWGR DGQQQWQVLD ANNASDADLW
IAYSLLEAGR LWDQPAYTQL GQHLLWRIAA QTVRKLPGLG VMLLPGDYGF EDAQGTRLNP
SYLPLQLLDR FSDVDPLWGE LAANTRRLWL ASSPKGFAPD WLLWTPAGKP AADTKHGNAG
DYDAIRVYLW VGMLAEGAAQ RRELVAHYAP MAALTQRQGL PPEHLDARSG EARGHGPAGF
SAALLPLLAA SPEHVAGLAA QRQRLREQPV EAKAYYSQVL ALFGQGFDEA RYRFDPHGRL
LPAWSAPCSE
|
|---|
| |