Gene PP_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2612 
Symbol 
ID1046001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2985405 
End bp2988395 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content59% 
IMG OID637146034 
Producthypothetical protein 
Protein accessionNP_744756 
Protein GI26989331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0746297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACG CCTCCGTAAG CAGCGCCACC TCCGGCCCTG CCTGCAGCGC TCGCGTGCCC 
ATCCTGCCAG TGCGCTACGC CATCGTGCCC CGCACCGCCG ACGCCCCCGC CTGCCGCTAT
GCCGATGCAG GCTTCAACCT GGAACAAGGC TTCCCCACGC TGCAGCACTC GGCCTACACC
CTCCGCGCTT TGCGCCCGGG CTATGTCTAC GTGTTCATGA AAGGCCCTCG GGGCGAAAAG
CTGGTCATTC ACGAGTACGT CGGCGCGGGC CTCTACAAGG AGCTGCGCTA TCAAGGGCTG
GAGGACTACC ACCGCCGTGA GCGCTACCTG TCCGGCCAGA GCACCGGCTG GGTGTGGGCC
GACACCTGCC AGGACACCGC CGAGGAAGTG TGGATCGGCT ACAGCCCGCA CCTGTGGACC
AACGCCATCA CCGCCCGTAT CACTGGTTCG GCAGCCCTGC GCAAACGGCA CATGCGCCAG
CTGGACATGG CCGAGCTGGT GAGCGGCAAC CAGGCGCCGT CCACCCAGCC CCATGTGTTG
CCAGTGAGTG CCCTGCAAAC CTGGGTCGAA GACTTCAAGC CAACCGAGCG GCGCATGCCG
CTGACCTGGA GCAGCGACCC GGTCACCGAA ACCTTGCCCA TCGGCAACCT CCATGCCATC
GCCCGGCACT ACCCCTGGAC CCAGCCGAAA GTGCCAGTGG TGGTGGCGCT CGCCGACGCC
GAAGGCATGG CCCTGGACCT GAGCCTGTCT GTCTCGGCCT ACCAGCATCA ACTGCGTGAC
CTGATGCCGG CCGAGCAACT GGAGCACACA AAACCTGCCC AACCTCCCGA GCAGGAGCGC
GTGCCGGCAT GCTACCGGCT GGATGCCGAA CAGCTCAGCC CGCAGAGCCG CGACTTTCAC
CATCGCAACC TGGTCGCCAT GTTGCTGAAC AAGACGCTGG AAAGCCTGTA CCCGGCGGAT
GCCCCTTCGC CGGAACTGGC CGCGTTCAGG CTGGGCACGT CACGCCGGGG GCCCGCCCTG
TCGCCGGCCG AGTCACATTT CCAGGCCCTC ACCCATGAAG ACTATTCCCC CAATGGTGCG
CGCCTGGCGC AGCGCCTCGA TGTCGACAAA TACCGGCGCT TCCTCGCCGA ACGCGACGCG
CTGGAACGAC GGATTGCCGC CCTGCGCAAC CTGGCCTTGC AAGCCAGCAA CGATCATGAC
GCCTGGCTGG CGACGGCCGA ACCCCAACAC ATTGATAACC CCTACAGCCT GGCTGCGGCA
CTGGCCTGTT ACGACCGCGA CGAACGCACC TCCGCCCGCG GTCTGGAAAT CTCACTGGCG
TTGCTGATTC ACCCAATGGG CCAGCCGACA CCCGGCACAG AAGATCATGA CCGGCGTTTC
AAACGCCTGG AGCAATGGCT GGACCAGCAC GACAGCCCGC TTTACACCGC CTTGGCGCCG
TTCAACCCGT TCAAGGACAA AGCCGATTCG ATCGGCACCT TGTTCGGCGC CAGCGACAAC
GTGATCGAAG GGCTCGCCGG TCGCTTCCCG GCCATGGCGG ATATCACCGA CCTCACCGCC
CAGTCGGTCA ATACCGTGGT GCTCAAGCGA CTGCGCGGGC AGACCCGATG GGATGCCAGC
CATGGCCTGC GGCGGCAGGT GCAGTTGGCA GCGCGGGAGG CGAATGCCGA GAAAGCGCTG
GGGTTGCTGG CGGCGCGCTA TCGAATCACC GAGCAGGCCA TTACGGAAAA TCCCTTTAGC
CAGGAGGTGC AGCGGTATTT GAAGAGCGGC ATGGCGCAGG TTGAAGAGAT GAAAGCGTTG
CGCATCTCGG GTAGCCGCAC AGTGTCCATC GAGCTGACCA CCACTGCGCG TGCGAAACCC
AACTTCCTTG GGTTACTCAC CTCGGGCGGT GGTGGTGGTT TAAACGCGGG GATGCTGTGG
TTCAACATCT TATCGCTCAA GACGGCCTAC AACAGCCTGC AAAAGAGCGA TGCACCGGAA
TACACCCTGG GGTTCGCTTC ATCTGTTTTC GGGGTGATTG GTGCAGCGGC GGCGACATTG
GTCAGCGTGC GGGCGACGCA AAAGGCCATG ATGTTGAAGT GGATCTCAAC GGCGCCAGGC
ATGGCCTTTG GTAACGGCAT CATCAACTTT CTGACGAGTA ATCTTTTCGC GCGGGCATCA
GGCTACCCGG CGATAATAAT GGGGTTTTCC TCAGATATTT TTAAGGCAAT ACGTCAATGG
CAGAACGGCA ATCTTATTTC AGGCTTATAT ACAGCGGCTG CCAGCGCGAC TACTGCTTTA
GGTTCGATTC TTGTTCTAGA AGGAAGCCTT GCCATCGCAG GCACGACAGT CCTCATTCCC
TTTGCAGGCT GGACAGCAGC TGGAATCGCC TTGATCGGAG CAACTTTGAT CGGTGGAGGT
CTATTCCTCT ACTCAAAAGC TCACTCCCGG CTTCACAGCC CTTTAGAATT ATGGGCCAGC
AGAAGCATCT TCGGGACAAG GGAAAACGAT GGAGAAATAC GGGATAATAT AAAGTTAGAC
TTTGATAAAA AATTGCCACC CTTTCGCCAC ATCCACGAAG AAATCAAGTC ATGGCAGATT
GAATTTTTCT CACCGAAAGC ATTGTTGGCA CCGTACTCTG AGCAGCTCGG CTTAGGCGCC
CTAACGACAC ATTTGGATAT AAATAACAAA TGGCCAACAC CTGACTGGGC AACAATTATC
CATACTCAGG TCACTAAACA AAACGCAACA CTCGAGCTAA CTATACTTTT ACCAGAATTC
GTAGTAGGTC AAAGCGAATG GTCAGGGAGT TTAGTGAGCC AGAATCTCGA CAGACAGACA
ACCCCACTCC AAATAAACCC TGACTGCCAT ATCACCCAAG CAGGTTTATT ACTTCATTAC
AAAACTGATG CTAGACAAAT CAGGTCTGCC ACGCTAACGA TTAATTACTA TGCCAACCAA
GGACTGGATG ACGACACTCC TTCTACTACC ACTATTCATC TGGAACGCTA A
 
Protein sequence
MTNASVSSAT SGPACSARVP ILPVRYAIVP RTADAPACRY ADAGFNLEQG FPTLQHSAYT 
LRALRPGYVY VFMKGPRGEK LVIHEYVGAG LYKELRYQGL EDYHRRERYL SGQSTGWVWA
DTCQDTAEEV WIGYSPHLWT NAITARITGS AALRKRHMRQ LDMAELVSGN QAPSTQPHVL
PVSALQTWVE DFKPTERRMP LTWSSDPVTE TLPIGNLHAI ARHYPWTQPK VPVVVALADA
EGMALDLSLS VSAYQHQLRD LMPAEQLEHT KPAQPPEQER VPACYRLDAE QLSPQSRDFH
HRNLVAMLLN KTLESLYPAD APSPELAAFR LGTSRRGPAL SPAESHFQAL THEDYSPNGA
RLAQRLDVDK YRRFLAERDA LERRIAALRN LALQASNDHD AWLATAEPQH IDNPYSLAAA
LACYDRDERT SARGLEISLA LLIHPMGQPT PGTEDHDRRF KRLEQWLDQH DSPLYTALAP
FNPFKDKADS IGTLFGASDN VIEGLAGRFP AMADITDLTA QSVNTVVLKR LRGQTRWDAS
HGLRRQVQLA AREANAEKAL GLLAARYRIT EQAITENPFS QEVQRYLKSG MAQVEEMKAL
RISGSRTVSI ELTTTARAKP NFLGLLTSGG GGGLNAGMLW FNILSLKTAY NSLQKSDAPE
YTLGFASSVF GVIGAAAATL VSVRATQKAM MLKWISTAPG MAFGNGIINF LTSNLFARAS
GYPAIIMGFS SDIFKAIRQW QNGNLISGLY TAAASATTAL GSILVLEGSL AIAGTTVLIP
FAGWTAAGIA LIGATLIGGG LFLYSKAHSR LHSPLELWAS RSIFGTREND GEIRDNIKLD
FDKKLPPFRH IHEEIKSWQI EFFSPKALLA PYSEQLGLGA LTTHLDINNK WPTPDWATII
HTQVTKQNAT LELTILLPEF VVGQSEWSGS LVSQNLDRQT TPLQINPDCH ITQAGLLLHY
KTDARQIRSA TLTINYYANQ GLDDDTPSTT TIHLER