| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2603 |
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| Symbol | |
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| ID | 1045991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2976062 |
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| End bp | 2976877 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146025 |
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| Product | xylose isomerase domain protein TIM barrel |
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| Protein accession | NP_744747 |
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| Protein GI | 26989322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0698398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC GAATTTTTTC CCTCGCGGCC CTGACGGTGC TCGAGCTGTC TCCACCGGAC
ATGGTCGAGG TCGCCGCCCG AGCGGGTTAC AGCCATGTCG GCCTACGGCT GGTGCCAGCC
ACCGAACAGG AGCGGCATTT CCCGTTGGTT GCCGATGCCG AACTGCGTCG GCAAACCCAG
GCGCGCCTGC GCGACACGGG CATCAAGGTG CTCGACCTGG AGATCCTGCG TCTTGAACCG
GCAACCTGTG TGGCCGATTT CGAAGCGATC CTGGCGGTGG GCGCCGAGCT GGGTGGCACT
GAATTGCTGG TAGCGGGCAA CGACCCCGAC GAAGCGCGCC TGACCGAACG CTTTGCCGCA
TTGTGCGAGC TGGCGGCGCA ATACGGCATT CACCCTCACC TGGAGTTCAT GCCCTGGACC
GACGTACGTG ACCTGCGTCA GGCCATGCGG GTGGTGGCCA ACGCCGACCG CGCCAATGGC
TGCGTACTGG TGGATGCCTT CCACTTCAAC CGCTCCGGCT CTTCGCTGGA CGACCTGGCG
CAACTGAAGC CGAAGCGCAT GCGCTATGCC CAACTGTGTG ACGTTGCTGG CCCGGTACCG
GCCGACATGG ACGAGATCCT GCGCCAGGCG CGTAACGAGC GACGCTTCCC GGGTGATGGC
GATGCCGATC TGGTTGGCCT GTTACACGCC TTGCCGCCGA GCGTGCCGCT GAGCCTGGAA
ATCCCCACGC GGCAATTGCT GGAGCAAGGC GTCAGTGGCG AACAGCGCGC GCGCATGGCG
CTGGAGAAAG CCCAGGCGGT ATTGGCCGCG GTCTGA
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| Protein sequence | MTDRIFSLAA LTVLELSPPD MVEVAARAGY SHVGLRLVPA TEQERHFPLV ADAELRRQTQ
ARLRDTGIKV LDLEILRLEP ATCVADFEAI LAVGAELGGT ELLVAGNDPD EARLTERFAA
LCELAAQYGI HPHLEFMPWT DVRDLRQAMR VVANADRANG CVLVDAFHFN RSGSSLDDLA
QLKPKRMRYA QLCDVAGPVP ADMDEILRQA RNERRFPGDG DADLVGLLHA LPPSVPLSLE
IPTRQLLEQG VSGEQRARMA LEKAQAVLAA V
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