Gene PP_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2514 
Symbol 
ID1045759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2861331 
End bp2862047 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID637145940 
Producthypothetical protein 
Protein accessionNP_744662 
Protein GI26989237 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC TGATCGGCAA GACCGGCATC GTCGTGCGTA ATATCCCACG CGTTGAGCCA 
CACATGATCG ATGCCCTGGG CCGGCTGGGT GTCGCCACGG TGCATGAGGC CCAAGGTCGC
AAGGGGCTGC TCAATACTGC CGTGCGCCCT ATCCAGCAAG GTGTGGCGGT GGCCGGCAGC
GCGGTAACCG TGCTGGTGGC CCCAGGCGAC AACTGGATGT TCCATGTTGC CGTGGAGCAG
TGCCGCCCAG GCGACGTACT GGTGGTGGCG CCCAGCTCGC CGTGCAGCGA TGGCTATTTC
GGCGACCTGC TGGCGACCTC GCTCCAGGCC CGCGGCGTGC TCGGCCTGGT GATCGATGCG
GGCGTGCGCG ACAGCCAGAC ACTGCGCGAC ATGGGCTTTG CCGTGTGGTC CCGCGCCATC
AACGCCCAAG GTACGGTGAA AGAGGTGCTG GGCTCGGTGA ACCTGCCGCT GCTGTGTGCC
GGGCAGCTCG TCAATGCCGG TGACATCGTG GTGGCCGATG ACGACGGCGT AGTGGTGGTG
CGCCATGGCG AAGCCCAGGC GGTACTCGAA GCCGCCACCC AGCGCGCCGA CCTGGAAGAA
CGCAAACGCC TGCGCCTGGC CGCCGGAGAG CTTGGCCTGG ACATCTACGA GATGCGCCCG
CGCCTGGCGG CGAAGGGCCT GCGTTATGTC GACCACCTCA CCGACCTGGA AGGCTGA
 
Protein sequence
MSGLIGKTGI VVRNIPRVEP HMIDALGRLG VATVHEAQGR KGLLNTAVRP IQQGVAVAGS 
AVTVLVAPGD NWMFHVAVEQ CRPGDVLVVA PSSPCSDGYF GDLLATSLQA RGVLGLVIDA
GVRDSQTLRD MGFAVWSRAI NAQGTVKEVL GSVNLPLLCA GQLVNAGDIV VADDDGVVVV
RHGEAQAVLE AATQRADLEE RKRLRLAAGE LGLDIYEMRP RLAAKGLRYV DHLTDLEG