Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2431 |
Symbol | |
ID | 1045568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2778431 |
End bp | 2779354 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145854 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744579 |
Protein GI | 26989154 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.557112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA TCACCGACCT CGAACTGTTT GCCCGCAGCA GCGTGCTGGG GAGCTTCACT GCCGCCGCCC ATGAAGCAGG CCTGCTGCCG GGCCAGGTGG CGGCCGCAAT CAAACGCCTG GAACGCGACC TGGATGTACG CCTGTTCGCC CGCACCACCC GCAGCCTGCG CCTGACCGCC GAGGGCGAGC GCTACCTGCC AACCGCGCTG AATGTGCTGG AAAGCCTGCG CCAGGGCCAT GAAGATCTGC ATGGCAACCC CAATAGCCTG CGCGGCACCC TGCAGGTATC GGCCCCTTCC GACATGGGCC GCAACATGCT GCTGCCCTGG CTCAGCGCCT TCCGCCGCGA CCACCCGGCA TTGCAACTGC GCTTCTTCCT GTCCGACCAG ATGGCCGACC TCAACCGCGA CCCTGTGGAT GTGGCCATCC GCTATGGCCT CAACCAGGAT GCCAACTACA TCGCCCTGCC ACTGGCCGAA TGGAACCGCC GCGTGCTGGT GGCCTCGCCC GACTACCTGG CCCGCCACGG CCGCCCGCTT ACCCCCGACG CGCTGCAGCA GCATGCCTGT CTGCTGTACA TGCAGCACAG CCGGGTGTAC GACAAGTGGC AGTTGGGTAA CCGCACCGTG CAGGTGCGTG GGCCGCTGGT CAGTGACGAT GCCGACGTCA TCCGCCGCCT GGCCATCCAG GGGGAAGGTA TCGTCTACAA GTCGTGGCTG GATGTCAGCG CCAACATCGC GGCCGGTGAA CTGGAAATCG TCCTGCCCGA ATTGATCGGC GAGCCTACCC CGCTGGCCTT GGTCTGCCCT CATCGCAAGC AGCTCACGCC TGCCGTGACG CAATTGCACC TGTGGCTACG CGAACGCTTC GAGGCCCTGC GCGCCCGGGC CCTGACCAAC GGCTGCACAA TCGTTCCAGA CTGA
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Protein sequence | MLRITDLELF ARSSVLGSFT AAAHEAGLLP GQVAAAIKRL ERDLDVRLFA RTTRSLRLTA EGERYLPTAL NVLESLRQGH EDLHGNPNSL RGTLQVSAPS DMGRNMLLPW LSAFRRDHPA LQLRFFLSDQ MADLNRDPVD VAIRYGLNQD ANYIALPLAE WNRRVLVASP DYLARHGRPL TPDALQQHAC LLYMQHSRVY DKWQLGNRTV QVRGPLVSDD ADVIRRLAIQ GEGIVYKSWL DVSANIAAGE LEIVLPELIG EPTPLALVCP HRKQLTPAVT QLHLWLRERF EALRARALTN GCTIVPD
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