Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2326 |
Symbol | |
ID | 1045319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2653683 |
End bp | 2654180 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145749 |
Product | universal stress protein |
Protein accession | NP_744475 |
Protein GI | 26989050 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.341198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000387778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCGCT CCATGCTGTA CGCCACCGAC CTCGGTGTCT ACGCCCCTTT CGTGATGCAA CATGCGCTGG CCCTGGCGCG CACGTTCGGT GCCGAGTTGT ATGTGATCCA CGCGGTCGAG CCGATGGGCC AGTTCGCCGA ATCCCTCCTG CAAAGCTACC TCGATGAGCA GACGCTCGAT CAATTGCACA GCCAGGGGGT GAACACGGTG ATGGCGAACA TAGAGCAGCG TGTACTGGAA AACTTTCGCG ACGAGTTGGG CGAAGAGGCT GACCTGGCGG TGATCAAGGC CGTGCGTGTG CGGCAGGGCG ACCCGGCGCA GGTGATTCTC GACCAGGCCC AGCGGCTAAG CGTCGACCTG TTGATATTTG GTAGCCACAG TGCCGGTGCC GGGGTGGATG TACCGCTGGG GCGCACGGCG GTGCGGCTGC TGCAGCTGTC GCCGGTGCCG GTGTACATGG TGCCCTTGGC GCAGCATCTG GGGCGTAGGA AAACGTGA
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Protein sequence | MIRSMLYATD LGVYAPFVMQ HALALARTFG AELYVIHAVE PMGQFAESLL QSYLDEQTLD QLHSQGVNTV MANIEQRVLE NFRDELGEEA DLAVIKAVRV RQGDPAQVIL DQAQRLSVDL LIFGSHSAGA GVDVPLGRTA VRLLQLSPVP VYMVPLAQHL GRRKT
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