Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2315 |
Symbol | greB |
ID | 1045305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2644260 |
End bp | 2644748 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637145738 |
Product | transcription elongation factor GreB |
Protein accession | NP_744464 |
Protein GI | 26989039 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000235815 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGCACCA ATATCATCAC CACAGAAGGC CATGAGGCGC TGAAGAAAGA GCTGGACCAC CTGTGGCGGG TGTATCGTCC GGAAATCACC CAAAAGGTTG CCTGGGCGGC TTCGTTGGGT GACCGCAGCG AGAACGCGGA CTACCAGTAC AACAAGAAGC TGCTGCGCGA AATCGACCGC AGGGTGCGAT ACCTGCGCAA GCGGCTTGAA GATGTGAAAG TGGTGGCGTA CTCGCCCGAG CAGGAAGGCA AAGTGTTTTT CGGTGCCTGG GTTGAGATCG AGAACGACGA GGGCGAGACC ATGAAGTTTC GCATTGTCGG CTACGACGAG ATCTACGGGC GCAACGATTA CATCTCGATC GATTCGCCCA TGGCCCGTGC CTTGCTGAAG AAGGAGGAGG GTGATGAGGT GGTGGTGCAT ACACCTACCG GTGAAGCGAC CTGGTATGTG AGCAGCATCC GTTACGGCCA GGGCGTCTCG ACGGACTGA
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Protein sequence | MSTNIITTEG HEALKKELDH LWRVYRPEIT QKVAWAASLG DRSENADYQY NKKLLREIDR RVRYLRKRLE DVKVVAYSPE QEGKVFFGAW VEIENDEGET MKFRIVGYDE IYGRNDYISI DSPMARALLK KEEGDEVVVH TPTGEATWYV SSIRYGQGVS TD
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