Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2305 |
Symbol | |
ID | 1045288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2635524 |
End bp | 2636570 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145728 |
Product | patatin |
Protein accession | NP_744454 |
Protein GI | 26989029 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00029553 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCATGA GTAAACGTGT GGCACTGGTA CTGGGATCGG GCGGAGCCCG AGGGTATGCG CACATCGGCG TGATCGAGGA AATCGAGCGC CGCGGCTACG ACATAGCCTG CGTCGCGGGG TGTTCCATGG GCGCGGTGAT TGGCGGTATC TATGCCGCCG GCAAGCTCGA CGACTATCGC AACTGGATCG AAAGCCTCGA CTACCTCGAT GTGCTGCGCC TGGTCGACGT CAGCTTTCGC CTCGGTGCGA TTCGCGGCGA CAAGGTGTTC GGGCAGATCC GCAAGATCGT CGGCGAGATG AACATCGAGC AACTGCGCAT ACCCTACACC GCAGTGGCCG CCGACCTTAC CAACCAGCAG GAAATCTGGT TCCAGGAAGG TTGCCTGCAT CAGGCCATGC GCGCCTCGGC GGCCATTCCC AGCCTGTTCA CGCCGGTGAT GCAAGGCAAC CGCATGCTGG TCGACGGTGG CATCCTCAAC CCGCTGCCAA TCGTGCCGGT GGTGTCCAGC CATTGCGACC TGATCATCGC GGTCAACCTC AACGCCACCA ACCAGAAGCA GTACCAGTTG CCGGTGATCG AGCGCCCGGC GGCGTTCAAG ATGCGCTTTG ACGCCTTGTT GAGCTCGCTG GGTTCACGTT TGCCATTCCG ACGCAAACCG GCGGAAGAGC TGATCCGCAT CGAAAAGGAA ATCGTCGCCG AGGGGTTGGC ACCGCCAAGC CCGTGGCTTG CCGACAGCGC CGACCCGGAA AGCCAGCAAC CGGCAGCGGC CCCGGAGCGC GAGGGCGCGC CGAAGTCGGC CACCGGCTCT TTCATCATCG ACAACGTGGG GCCAGCCTCG CTGCTGGATT TGATCAACCA GAGCTTCGAG GTCATGCAGA CTTCGTTGGC ACAGTACAAG ATTGCCGGCT ATCCACCGGA TGTGCTGATC AACGTACCCA AGCGGGTGTG CCGGTTTTTC GAGTTCTACA AGGCGCCGGA GCTCATCGCC CTGGGGCGAG AGATTGCACG CGATACGCTG GACAGTTATG AAGGGGTGAA GCGGTAG
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Protein sequence | MFMSKRVALV LGSGGARGYA HIGVIEEIER RGYDIACVAG CSMGAVIGGI YAAGKLDDYR NWIESLDYLD VLRLVDVSFR LGAIRGDKVF GQIRKIVGEM NIEQLRIPYT AVAADLTNQQ EIWFQEGCLH QAMRASAAIP SLFTPVMQGN RMLVDGGILN PLPIVPVVSS HCDLIIAVNL NATNQKQYQL PVIERPAAFK MRFDALLSSL GSRLPFRRKP AEELIRIEKE IVAEGLAPPS PWLADSADPE SQQPAAAPER EGAPKSATGS FIIDNVGPAS LLDLINQSFE VMQTSLAQYK IAGYPPDVLI NVPKRVCRFF EFYKAPELIA LGREIARDTL DSYEGVKR
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