Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2216 |
Symbol | |
ID | 1045081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2526956 |
End bp | 2528083 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145630 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | NP_744365 |
Protein GI | 26988940 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.585123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTAA ATGACGAGCA ACAACAGATC GCCGACGCGG TACGTGCGTT CGCCCAGGAA CGCCTGAAGC CGTTTGCCGA GCAATGGGAC AAGGACCATC GCTTCCCGAA AGAGGCCATC GACGAGATGG CCGAACTGGG CCTGTTCGGC ATGCTGGTGC CGGAGCAGTG GGGCGGTAGC GACACCGGTT ATGTGGCCTA TGCCATGGCC TTGGAGGAAA TCGCTGCGGG CGATGGCGCC TGCTCGACCA TCATGAGCGT GCACAACTCG GTGGGTTGCG TGCCGATCCT GCGCTTCGGC AACGAGCAGC AGAAAGAGCA GTTCCTCACC CCGCTGGCGA CAGGTGCGAT GCTCGGTGCT TTCGCCCTGA CCGAGCCGCA GGCTGGCTCC GATGCCAGCA GCCTGAAGAC CCGCGCACGC CTGGAAGGCG ACCATTACGT GCTCAATGGC AGCAAGCAGT TCATTACCTC GGGGCAGAAC GCCGGCGTAG TGATCGTGTT TGCGGTCACC GACCCGGAGG CCGGCAAGCG TGGCATCAGC GCCTTCATCG TGCCGACCGA TTCGCCGGGC TACCAGGTAG CGCGGGTGGA GGACAAACTC GGCCAGCACG CCTCCGACAC CTGCCAGATC GTTTTCGACA ATGTGCAAGT GCCAGTGGCC AACCGGCTGG GGGCGGAGGG TGAAGGCTAC AAGATCGCCC TGGCCAACCT TGAAGGCGGC CGTATCGGCA TCGCCTCGCA AGCGGTGGGT ATGGCCCGCG CGGCGTTCGA AGTGGCGCGG GACTATGCCA ACGAGCGCCA GAGCTTTGGC AAACCGCTGA TCGAGCACCA GGCCGTGGCG TTTCGCCTGG CCGACATGGC AACGAAAATT TCCGTTGCCC GGCAGATGGT ATTGCACGCC GCTGCCCTTC GTGATGCGGG GCGCCCGGCG CTGGTGGAAG CGTCGATGGC CAAGCTGTTC GCCTCGGAAA TGGCCGAAAA GGTCTGTTCG GACGCCTTGC AGACCCTGGG CGGTTATGGC TATCTGAGTG ACTTCCCGCT GGAGCGGATC TACCGCGACG TTCGGGTTTG CCAGATCTAC GAAGGCACCA GCGACATTCA GCGCATGGTC ATTGCGCGCA ATCTTTGA
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Protein sequence | MLVNDEQQQI ADAVRAFAQE RLKPFAEQWD KDHRFPKEAI DEMAELGLFG MLVPEQWGGS DTGYVAYAMA LEEIAAGDGA CSTIMSVHNS VGCVPILRFG NEQQKEQFLT PLATGAMLGA FALTEPQAGS DASSLKTRAR LEGDHYVLNG SKQFITSGQN AGVVIVFAVT DPEAGKRGIS AFIVPTDSPG YQVARVEDKL GQHASDTCQI VFDNVQVPVA NRLGAEGEGY KIALANLEGG RIGIASQAVG MARAAFEVAR DYANERQSFG KPLIEHQAVA FRLADMATKI SVARQMVLHA AALRDAGRPA LVEASMAKLF ASEMAEKVCS DALQTLGGYG YLSDFPLERI YRDVRVCQIY EGTSDIQRMV IARNL
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