Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2210 |
Symbol | |
ID | 1045073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2516637 |
End bp | 2517500 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145624 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744359 |
Protein GI | 26988934 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.441288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT TCCAGCTACG CGCCTTCGAC GCCGTGGCCC GTGAGGGCAG CTTTACCCGT GCTGCCGAGC GCCTGTTCAT CAGCCAGCCG GCGGTGACCG GGCACGTCAA GGCCCTGGAG GAGCACTACC AGATCACCTT GTTGCGGCGT ACTGCACGGC GCGTGGAGCT GACCGAGGAG GGCACGCGCC TGGCGGCCAT CACGCGCGCC ATGTTCGGCC TGGCCGAAGA AGCGCAGGCC ATGCTTGAGG CCAACCGCCA GTTGCTGACC GGGCGCCTGG AGGTAGCCGC CGACGGCCCG CATCGGGTCA TGCCGATGCT GGCGCTGCTG CGTGAGCGGT ACCCTGGTGT CACCGTCAAC TTGCGCCTGG GCAATGCTCA GGAGACCTTG GCTGCGCTGC TCGGCGAGCA TGCCGACGTG GCGGTGCTGA CCGAAATCGA GCCGCGCAAG GGGCTGCATC TGCAAAATCT CTGTGAGTCG CGCCTGTGTG CGCTGTTACC GGTGGGGCAC GCCTGGGCCA GCGCGCGGGA GGACTTGCCG TTGGCCGCGC TGCACCAGCA GATCATGGTG CTGCGCGAAC CCAGCTCCAC CACCCGGCGC ACCTTCGACA AGGCCTGCAT CAAGGCGGGC GTGCAACCGC GTGTATTGCT GGAGCTGGAC AGCCGGGAGG CGGTAACCGA GGCTGTGGCC TCGCAGCTGG GGATTGGCGT TGTTTCTTCC ACTGAAGTGG CCAATGATCC CCGTGTGGTG GCACGACCAT TGGCCGGCGA GGGCCTTGTC AACCAACACG TGATCGGCTG CCTGGAGCGT CGTCGCGAAC TGCGCCTGAT TCAGGCATTC CTGAGCCTGG CAGCAGGGCT ATGA
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Protein sequence | MNLFQLRAFD AVAREGSFTR AAERLFISQP AVTGHVKALE EHYQITLLRR TARRVELTEE GTRLAAITRA MFGLAEEAQA MLEANRQLLT GRLEVAADGP HRVMPMLALL RERYPGVTVN LRLGNAQETL AALLGEHADV AVLTEIEPRK GLHLQNLCES RLCALLPVGH AWASAREDLP LAALHQQIMV LREPSSTTRR TFDKACIKAG VQPRVLLELD SREAVTEAVA SQLGIGVVSS TEVANDPRVV ARPLAGEGLV NQHVIGCLER RRELRLIQAF LSLAAGL
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