Gene PP_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2198 
Symbol 
ID1045061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2504211 
End bp2505356 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID637145612 
Productglucose sorbosone dehydrogenase 
Protein accessionNP_744347 
Protein GI26988922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAG CACACTGGCT AGCCACCCTG ACCGCCGCTG CGCTACTGCC ACTGTGGGCG 
CATGCAGCGG CCGAACAGCG GTTCCCCAGC GAAGAAGGCA CCTTGATCGT CGACACGCTT
GCCGATGGCC TGCGCAACCC CTGGGCCCTG GCCTTCCTGC CCGGTGGCAA GGACATGCTG
GTGACCGAGC GCGCCGGCAA CCTGCGGCTG GTCAATGCCG AAGGCAAGGT TGGCCCGTCG
ATCAGCGGTG TACCCAAGGT CTGGGCCGAA GGCCAGGGCG GCTTGCTGGA TGTGGCGCTG
TCACCGGAGT TCGGCAAGGA CCGCACCGTC TACCTGTCCT ACGCCGAGGA GGGCAGTGAC
GGCAAGGCCG GTACTGCAGT CGGCCGCGGG CAGCTGTCCG AAGACCGCGC CCGGCTGGAG
AATTTCACCG TGATCTTCCG CCAGCAGCCC AAGCTGTCGG TGGGTAACCA CTTCGGCTCG
CGGCTGGTGT TCGACCGCGA CGGCTACCTG TTCATCGCCC TGGGCGAGAA CAACCAACGT
CCCACTGCCC AGGACCTGGA CAAGTTGCAA GGCAAGGTCG TGCGTATTCT GCCGGACGGC
GAAGTGCCCA AAGACAACCC CTTCGTCGGC AAGGACAACG TGCGCCCGGA GATCTGGTCG
TACGGCCACC GTAATCAGCA AGGCGCCGCG CTCAACCCCT GGACCGGCCA ACTATGGACC
CACGAACACG GCCCGCGCGG AGGGGATGAA ATCAACATCC CAAAGCCTGG CAAGAATTAT
GGTTGGCCGA TTGCGACCCA CGGCATCAAC TACTCGTTGC TGCCCATCCC CGAGGCCAAG
GGCGAGCATG TGGACGGCAT GGTCGACCCG CACCATGTAT GGGAAAAGTC ACCGGGTATC
AGCGGTATGG CTTTCTACGA CAGCCCAACG TTCAAGGCCT GGGACCACAA TCTGTTCATA
GGGGCGCTGG CCACGCAGGA ATTGATCCGC TTGCAACTGG ATGGCGACAA GGTGGTGCAC
GAAGAGCGGT TGCTCGGTGA CCTGAAGGCG CGTATCCGTG ATGTGCGGGT GGGGCCAGAT
GGTTACCTGT ATGTACTGAC CGATGACAAG GATGGCGCGC TACTCAAGGT CGGCCTGGCC
GACTGA
 
Protein sequence
MLRAHWLATL TAAALLPLWA HAAAEQRFPS EEGTLIVDTL ADGLRNPWAL AFLPGGKDML 
VTERAGNLRL VNAEGKVGPS ISGVPKVWAE GQGGLLDVAL SPEFGKDRTV YLSYAEEGSD
GKAGTAVGRG QLSEDRARLE NFTVIFRQQP KLSVGNHFGS RLVFDRDGYL FIALGENNQR
PTAQDLDKLQ GKVVRILPDG EVPKDNPFVG KDNVRPEIWS YGHRNQQGAA LNPWTGQLWT
HEHGPRGGDE INIPKPGKNY GWPIATHGIN YSLLPIPEAK GEHVDGMVDP HHVWEKSPGI
SGMAFYDSPT FKAWDHNLFI GALATQELIR LQLDGDKVVH EERLLGDLKA RIRDVRVGPD
GYLYVLTDDK DGALLKVGLA D