| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2192 |
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| Symbol | |
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| ID | 1045054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2496772 |
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| End bp | 2497896 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145606 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_744341 |
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| Protein GI | 26988916 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTT CACCCATGTC GGGCCTGCTG GCAAGTTTCC AGGAGCACTA CGACGACCTG
CTGCAGTTTC TGACACGGCG CATGAGTGAC CGCCAGCGCG CGGCCGATGT GGCGCAGGAA
ACCTACCTGA AGCTGGTGAA CATCGACGAG CAGGCGGTGC CGGTGTTGCA CGCGCGCAGT
TTCATCTTCC GCGTCGCCGG CAACCTGGCG ATTGACGCTT TGCGCCGTGA GCAACGCATC
GCCGCCAGCC ACGACGACAG CGACGGAGCC TGTGAGGTGG CCTGCCCGGC GCCTGCACCC
GAGGCGGCGT TGCTGGCCCG CGAGCGTTTG CAGATTCTTG ACCAGGCGCT GCTGCAGTTG
CCCGACAATG CCCGCCAGGC GCTGTTGCTC AACCGTGTCG AGGGCCTGAC CCAGAAGCAG
GTCGCTCAAC GCCTGGGGGT TTCCGAGAGC ATGGTGGCAA AGTATATCGG CCAGGCCTTG
CGCCATTGCC GCGGCCGGCT GAAGCAGGCG GGTGTGGCGG CTTCGGTGGT GTTGCTGGTC
GCCGCTGTGG CGGGTTGGCA GCAAGCCCCG ATACTGCTGG CCGATTACCA CACCGCCGTG
GGCGAGCGGC AGGTCATTAC CCTGACAGAT GGCACACGGG TGACGCTGAA CAGCGCCAGT
GCCTTGAGCG TGGCGTTCAG CGAGCATGAA CGGCGTGTGG TACTCGATGC GGGTGAGGCG
TTGTTCGAGA CCGCCGATGA TTCACGTCCG TTTGTGGTCG AAACGGCCGG TGCGCGGGTG
CAGGGCAATG CTGCCACCTT CAGCGTGCAG CGCGATGGCC ACGTCGTGTT GGCTCGCGGT
GAAGCCAAGG TGGGTGAACA TGAACTGGCA GTGGCGGCCG ATGCCGGCAC GCAGATGGCC
TGGCAGCGTG GCAAGCTGAT CTTCAACGGC AAGCCGCTGG GGCAGGTGCT GACCGAGCTT
GAGCGATACC GGCATGGGCG CATTGTGTTG TCCGACAGCA AGCTGGCTGC GATGGAAGTG
AGCGGGGTGT TTGACCTGGA TGAACCTGAG GCCCTGTTGC GGACGTTGGA GCAGCGGTAT
GGCCTGAAGG TGACTTACCT GCCGTGGTTG GCCGTGGTGC ATTGA
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| Protein sequence | MLTSPMSGLL ASFQEHYDDL LQFLTRRMSD RQRAADVAQE TYLKLVNIDE QAVPVLHARS
FIFRVAGNLA IDALRREQRI AASHDDSDGA CEVACPAPAP EAALLARERL QILDQALLQL
PDNARQALLL NRVEGLTQKQ VAQRLGVSES MVAKYIGQAL RHCRGRLKQA GVAASVVLLV
AAVAGWQQAP ILLADYHTAV GERQVITLTD GTRVTLNSAS ALSVAFSEHE RRVVLDAGEA
LFETADDSRP FVVETAGARV QGNAATFSVQ RDGHVVLARG EAKVGEHELA VAADAGTQMA
WQRGKLIFNG KPLGQVLTEL ERYRHGRIVL SDSKLAAMEV SGVFDLDEPE ALLRTLEQRY
GLKVTYLPWL AVVH
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