Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2111 |
Symbol | aer-2 |
ID | 1044963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2406996 |
End bp | 2408561 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145524 |
Product | aerotaxis receptor Aer-2 |
Protein accession | NP_744260 |
Protein GI | 26988835 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0317394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAACA ACCAGCCGAT TACCCAGAGA GAACGGACTT TCCCAGCCCA GCAGCGGTTG ATCTCCACTA CCAACGCCAA GGGTGTGATC ACCTACTGCA ACGATGCCTT TATCGAAATC AGTGGTTTCA CCCGCGAGGA GCTGACGGGC GCACCGCACA ACCTGGTGCG CCACCCCGAC GTACCGCCTG CCGTGTTTGC CCATATGTGG CAAACCCTCA AGCAGGGCCA GCCGTGGATG GGTATCGTCA AGAACCGCTG CAAGTCCGGC GACCATTACT GGGTCAACGC CTATGTCACC CCCATTTTCG ATAACAACCA GGTTGTCGGC TTCGAGTCGG TGCGGGTCAA ACCCACCGCC GAACAGATCC GCCGCGCCGA GGCCCTGTAC CAGCGCATCA ACCAGGGTAA GCCGCCGGTA CCGCGTCGCG ACAAGTGGCT GCCAGTGCTG CAGGACTGGC TCCCGTTCAT CCTGATCAGC CAGGTGGGCT TCCTGATCGG CAACTGGCTG GGTCATTCCT GGGGCTTTGC CTTGGCCGCA GGGCTTTCGG TACCACTGGG TCTGCTTGGC CTGAGCTGGC AGCAGCGCGG CCTCAAGCGC CTGCTGCGCC TGGCCGAGCA AACCACTTCC GACCCACTGA TCGCGCAGAT GTTCACCGAC AGCCGTGGCG TGCAGGCGCG CCTGGAAATG GCCATGCTCA GCCAGGACGC ACGCATGAAA ACCTGCCTGA CGCGTCTTCA AGACAGTGCC GAACACCTGA GCGACCAGGC ACGCCAGTCC GATGCCCTGG CGCACAAGAG CTCTACGGGG CTGGAGCGCC AGCGGGTGGA GACCGAGCAA GTCGCCGCCG CGGTAAACCA GATGGCCGCC ACCACTCAGG AAGTGGCCAA CCATGTACAG CGCACCGCCG ATGCCACCCA GGAAGCCAAC CGCCTGACCA GCCAGGGCCG GCAGATTGCC GGAGAAACCC GCGAGGCCAT CGAGCGCCTG TCGGCGGCAG TGGGCGAGAC CGGCCAGACG GTTACGCAAC TGGCCAAAGA CAGCGACGAG ATTGGGGGCG TGGTCGACGT GATCAAGGGC ATCGCCGACC AGACCAATCT GCTGGCGCTG AACGCAGCCA TTGAAGCGGC GCGCGCCGGT GAAATGGGCC GTGGCTTTGC CGTGGTGGCT GATGAAGTGC GACAGTTGGC CCAGCGCACC GCCGAATCCA CCGGGCAGAT CCACGGCCTG ATCGCCAAGC TGCAACAGAC CGCCAGCAAC GCAGTGCTGA CCATGGAAAC CGGCCACCGC CAGGCACAGG AAGGCGTCGA TCGGGTAATG CAGGCCGACG AGGCGCTGGT AGGCATCAGC GAAGCGGTGG CCAATATCAC CGACATGGCC ACCCAGATTG CTGCTGCAAC CGAGGAGCAG ACCGCAGTGG CTGACGAGAT CAGCCGCAAC ATCAGCACCA TTGCCGAACT GGCCGACCAG ACCGCCGAAC AGGCGCAGCA CTCGGCACTG CTGAGCGAAG AACTGACCAG CACGGCGGGT AGCCAGTATT CGCTGGTGGA GCGCTTCAAC CGCTGA
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Protein sequence | MRNNQPITQR ERTFPAQQRL ISTTNAKGVI TYCNDAFIEI SGFTREELTG APHNLVRHPD VPPAVFAHMW QTLKQGQPWM GIVKNRCKSG DHYWVNAYVT PIFDNNQVVG FESVRVKPTA EQIRRAEALY QRINQGKPPV PRRDKWLPVL QDWLPFILIS QVGFLIGNWL GHSWGFALAA GLSVPLGLLG LSWQQRGLKR LLRLAEQTTS DPLIAQMFTD SRGVQARLEM AMLSQDARMK TCLTRLQDSA EHLSDQARQS DALAHKSSTG LERQRVETEQ VAAAVNQMAA TTQEVANHVQ RTADATQEAN RLTSQGRQIA GETREAIERL SAAVGETGQT VTQLAKDSDE IGGVVDVIKG IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTASN AVLTMETGHR QAQEGVDRVM QADEALVGIS EAVANITDMA TQIAAATEEQ TAVADEISRN ISTIAELADQ TAEQAQHSAL LSEELTSTAG SQYSLVERFN R
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