| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2097 |
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| Symbol | |
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| ID | 1044949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2391469 |
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| End bp | 2393871 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145511 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | NP_744247 |
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| Protein GI | 26988822 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.115037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGT GTGGCGTGCG TGCGCGGTTG CTTGGCTTGT GCACAGAGAG GGCGTCCGCC
TGGGCGATGG CGCTGATTGC ACTGGTGGCG GGCGGCTTGT TGACCGCTGC CTTGGCATTT
GCCGCGCACA CCTTCTACAA ACAGCAGCTG CGCCAGCGCT TCGAGCTGCT GGCCAGCGAG
CGCGCCAGCC GTATTGCCGA GCGCTTTGAC GAACAGCAGC AGCGCTTGGA CGGGCTGCGG
CGGTTCTTCA GTTTTTCCAG CGAGATCACC CCGCGCGAAT TCGACGGCTA TGCCCGACCA
CTGCTGCAAC GCACCTTGGC CTATGCCTGG GCGCCGCGCG TCGAGGCTGC GCAACGCGCC
GAATTCGAGC GCCTGGCCAG TGCCCATACC GGCCCAGGTT ATGTGATCCG TGACCAGGAC
GCGCAAGGCC AATGGCGCCC GGCTTCGCAG CGCGACCATT ACTTCCCGGT GCTCTATACC
CAATCGAGCG AGCGGCCCGG GTTGCCTTAC GGCCTGGACC TCGCTGGTCA AAGCGAGCCC
CAGGCGGCCC TGGCGCGGGC GCTGGCGCCG GCGCTGGCGC CGGGCAGCAT GGCGGTGTCC
GAGCCATTGG CCCTGTTCGA TACCCAGTCG GCAGAGCGCG GCCTGCTGAT GGTGGCGCCG
GTATTTTCCG ATGCCGACCC CCGCGGTGCG GCAGTGGGCT ATGTGATGGC GTTGCTGAGC
ATGCGCGAGC TGGTCAGCGA CGGTCGACCG GTAGCGGTTG ATGACAACCT GGTCGTGCGC
ATCACGGACC CGTCCGGGTT ACAAGGCCCC GTCGTGTTGT TCGACTCGCA AAATCCGGTC
GCGCCCTTGG CCCTGGCCAG CAATCAGTTG TTGCGCCTGG CCGATCACCA TTTCCAGCTG
AGCATTCAGC CAAGCCAGGC GTTCGCGCAG GCGAACCGCT CCTCGGCGGT GATGGCGGTC
GGTTTGTTGG GCGGACTTTT GAGCCTGTTG CTCAGCGTGC TGCTCTACAG CCTGTTCAGC
CAGCGTCAGC GCGCCCTGGC CCTGGTCGCT CAGCGTACTG CCGAGTTGCA GGTCAGCGAG
CAGTCGTTGC GTGGCACCCA CAACCAACTG CGCAGTGTGC TGGATGCCGC GACCCAGGTG
GCGATCATCG CCACCAACCT CAAGGGGGTG GTCAGCACGT TCAACGCCGG TGCCGAACGC
ATGCTCGGTT ACGCGGCCAG CGAAGCGATC GGCCGGTTGC GCCTTGAAGA CCTGGTACTG
CCGGAGGAGC TGAACCTGCG TGCCCAGGCC TTGAGCTTGC GTTTTGGCCG CGCCATTGCT
GGCGGCCAGG CGATGTTCGC TGAAACGGTG CAGGAGCACG GGGCCGAGCC TGGCGAGTGG
ACCTTGCTAC GGGCCGATGG CAGCCAGCTG GTCGCCAACA TGCTGGTGAC TGCCATGCTC
GACGAACAGG GGTTGTGGGT TGGCTACCTG GCCATCTGCA TTGACGTGAC CGAGCGGCGC
CGGGTGCATG AGGCGTTGGC AGCGCGTGAC CGGTTGCTGG AAAAGCTCAG TGCCGAGGTG
CCGGGCGGCA TCTACCAATA TCGCCTGGAT GCCAACGGCC ATTCGTGTTT TCCATACGCC
AGCATGGGCC TGTATGACAT TTATGAGATC GACCTGATGC AGTTGCGTGA GGATGCCTCG
GCGGTGTTCG AACGTATCCA CCCCGATGAC CTGGAACGCG TGCGCCGCTC GGTGCGCTAT
TCGGCCGAAC ACTTGTCACC CTGGCGTGAG GAGTATCGAG TCTGCCTGCC ACGGGCCGGA
CTGCGCTGGG TGCGTGGCGA GGCGACCCCG GAAGTGGGCG AGCAGGGCTG CACCCTGTGG
CATGGCTACC TGACTGACAT CTCCGACCTG AAGGGTGTGG AGGAAGAGTT GCGGGCGCTG
TCGGTCACCG ACTCGCTGAC CGGTATCCAT AACCGTCGCT ATTTCCAGGA GCGGCTCAAG
ATCGAACTGG AAAGGGCCCA GCGCGATGGC TTGCCGCTGG CGGTGATCAT GCTCGACATT
GATCACTTCA AGCGCATCAA CGACCGCTTC GGCCATGCCG TCGGCGACCG GGTGCTGCGT
AGCCTGTGCC AGCGCATCGC TCAGCGTTTG CGGCGTACCG ATGTGTTCTG CCGCTTGGGC
GGGGAAGAGT TCATGGTGCT TTGCCCGGGC AGCGATGCCA ATCAGGCCCG GCTGCTGGCG
CTGGAGTTAT GGCAAGGGGT GCGCAATGTA CCGGTGGAAG GCGTGGGCCA GGTGACTGCA
AGCTTCGGTG TGGCGGGCTG GCGGTCGGGC GAAGGCGCCG ATGCCTTGCT GTTGCGCGCC
GACGCCGGCG TATATGCGGC CAAACAGGCC GGGCGGGACC GGGTGGAGGG GGAGCCGGTA
TAA
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| Protein sequence | MSKCGVRARL LGLCTERASA WAMALIALVA GGLLTAALAF AAHTFYKQQL RQRFELLASE
RASRIAERFD EQQQRLDGLR RFFSFSSEIT PREFDGYARP LLQRTLAYAW APRVEAAQRA
EFERLASAHT GPGYVIRDQD AQGQWRPASQ RDHYFPVLYT QSSERPGLPY GLDLAGQSEP
QAALARALAP ALAPGSMAVS EPLALFDTQS AERGLLMVAP VFSDADPRGA AVGYVMALLS
MRELVSDGRP VAVDDNLVVR ITDPSGLQGP VVLFDSQNPV APLALASNQL LRLADHHFQL
SIQPSQAFAQ ANRSSAVMAV GLLGGLLSLL LSVLLYSLFS QRQRALALVA QRTAELQVSE
QSLRGTHNQL RSVLDAATQV AIIATNLKGV VSTFNAGAER MLGYAASEAI GRLRLEDLVL
PEELNLRAQA LSLRFGRAIA GGQAMFAETV QEHGAEPGEW TLLRADGSQL VANMLVTAML
DEQGLWVGYL AICIDVTERR RVHEALAARD RLLEKLSAEV PGGIYQYRLD ANGHSCFPYA
SMGLYDIYEI DLMQLREDAS AVFERIHPDD LERVRRSVRY SAEHLSPWRE EYRVCLPRAG
LRWVRGEATP EVGEQGCTLW HGYLTDISDL KGVEEELRAL SVTDSLTGIH NRRYFQERLK
IELERAQRDG LPLAVIMLDI DHFKRINDRF GHAVGDRVLR SLCQRIAQRL RRTDVFCRLG
GEEFMVLCPG SDANQARLLA LELWQGVRNV PVEGVGQVTA SFGVAGWRSG EGADALLLRA
DAGVYAAKQA GRDRVEGEPV
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