| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2081 |
|---|
| Symbol | |
|---|
| ID | 1042771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2372157 |
|---|
| End bp | 2372975 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637145495 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744231 |
|---|
| Protein GI | 26988806 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0669106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA CCGCGTTCTT CATCTCCGAC GGCACCGGTA TCACTGCCGA AACCCTGGGC
CAGAGTTTGC TCGCGCAATT CGAGAGCATT CCCTTCAACA AATTCACCCG CCCTTACATC
GACTCGCCGG ACAAAGCGCG GGTCATGGTC CAGCAAATCA ACGCTGCGGC CGAGCGGGAT
GGGGTCCGCC CGATCATCTT CGACACCATT GTCAACCAGG ACATCCGCGA GATCCTGGCG
ACGTCGAATG GCTTCATGAT CGACATCTTT TCTTCGTTTT TATCCCCACT TGAGCAGGAA
TTGATTGCCC ATTCGTCGTA TTCCGTGGGC AAATCCCACT CGATTGGTGG CAATTCCAAC
TACATGGAAC GCATCGAGGC GGTGAATTTC GCCCTGGATA ACGACGATGG TGCACGCACC
CACTACTACG ACAAAGCCGA CCTGATTCTG GTTGGCGTGT CGCGTTGCGG CAAAACCCCA
ACCTGCCTGT ACATGGCCAT GCAGTTCGGC ATCCGTGCCG CCAATTACCC GCTGACCGAG
GATGACATGG AGCGCCTGCA GCTGCCGGCG GTGCTGAAAA AGCACCACAG CAAGCTGTTC
GGCCTGACCA TCGACCCCGA CCGCCTCACC GCCATCCGCC ACGAACGCAA GCCCAACAGC
CGTTATTCCA GCTTTGCCCA GTGCGAATTC GAAGTGCGTG AAGTGGAAAG CCTGTTCCGC
AGGGAGAACA TTCCCAATAT CAATTCCACG CATTTTTCGG TGGAAGAGAT TTCCGCCAAG
ATCCTGGTCG AAAAAGGCGT GGAGAGACGG TTCAAGTAA
|
|---|
| Protein sequence | MKRTAFFISD GTGITAETLG QSLLAQFESI PFNKFTRPYI DSPDKARVMV QQINAAAERD
GVRPIIFDTI VNQDIREILA TSNGFMIDIF SSFLSPLEQE LIAHSSYSVG KSHSIGGNSN
YMERIEAVNF ALDNDDGART HYYDKADLIL VGVSRCGKTP TCLYMAMQFG IRAANYPLTE
DDMERLQLPA VLKKHHSKLF GLTIDPDRLT AIRHERKPNS RYSSFAQCEF EVREVESLFR
RENIPNINST HFSVEEISAK ILVEKGVERR FK
|
|---|
| |