| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2077 |
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| Symbol | lysA-1 |
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| ID | 1042789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2364206 |
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| End bp | 2365438 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145491 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | NP_744227 |
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| Protein GI | 26988802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0728152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CCTTCACCCT CTTGGCCGAG GCGGTTCGCC AGCACGGCTC GCCACTATGG
GCATACGACA CCCGCACCAT CGCCGATCGT GTCGAGCAGC TGAACGTGTT CGACACCGTA
CGTTTCGCCC AGAAAGCCAA CCCGAACTTG CATGTGCTGC GCCTGATGCG CGCCCATGGC
CTGGTGCTGG ACGCCGTGTC GCTGGGTGAG ATGGAACGGG CCTTCGCCGC CGGCGCGAGC
GTTGACGGTG ACCCTGCCGG CGTGGTGCTG ACCTGCGACG CGCTGGACCG CCCCACCCTG
GAACGCGTGG TGGCGTCGAA GATCGAAGTC AACGCCGGCT CCATCGACAT GCTGCACCAA
CTGGGTGAGC GCTCGCCCGG CCACCGCGTG TGGATCCGCA TCAACCCGGG CTTCGGCCAT
GGCCACAGCC GCAAGACCAA TACCGGCGGC GAAAACAGCA AGCATGGCAT CTGGCACGAA
GAGCTGGACG AGGCGCTGGC GTGCATCAAG GCCCATGGCC TGCACCTGGT GGGCGTGCAC
ATGCACATTG GCTCCGGGGT GGACTACCAG CACCTGGAAC AGGTGGCCCG CTCGATGATC
GAGCTGATCG GCCGCCTGGG CGTGGACATC GAGGCGTTCT CCATCGGCGG CGGCCTTTCC
ACCCCTTACC GCAGCACCGA CAAACCGGTC GACCTGCAGC GTTATGCGCA GACCTGGGCG
GTGGCGCGCA AGGAGATCGA AGCGATGCTC GGCCACCCGG TGCGCATGGA GATCGAACCC
GGGCGCTTCC TGGTGGCGGA GTCGGGCTAT CTGGTGGCCG AAGTCCGTGC CGTGAAACAG
GTGGGGCGCA ATACCTTCGT CATTATCGAC GCCGGCTTCA ACGACCTGAT GCGCCCGGCG
ATGTACGGCG CCTACCACGG CATGACCCTG CTCGATGCCG ATGGCCAGGC AGTAGATCGC
CCGCGCCAGC CGACCGTGGT GGCCGGGCCG TTGTGTGAAT CGGGTGACGT GTTCACCCAG
GATGACCAGG CACTGACCCC GCAGGACCTG CCCCAGGCAC AGGTGGGCGA CCTGCTGGTG
ATCCACGATG CCGGGGCCTA TGGCGCGTCG ATGTCGTCGA ACTACAACAG CCGGCCGCTG
CTGCCGGAGT TCCTGATCGA GAACGGTGCC CTGCGGATGA TCCGCCGGCG GCAGACGGTG
CAGGACCTGC TGAGCCTGGA GGCGGATTTC TAA
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| Protein sequence | MTAPFTLLAE AVRQHGSPLW AYDTRTIADR VEQLNVFDTV RFAQKANPNL HVLRLMRAHG
LVLDAVSLGE MERAFAAGAS VDGDPAGVVL TCDALDRPTL ERVVASKIEV NAGSIDMLHQ
LGERSPGHRV WIRINPGFGH GHSRKTNTGG ENSKHGIWHE ELDEALACIK AHGLHLVGVH
MHIGSGVDYQ HLEQVARSMI ELIGRLGVDI EAFSIGGGLS TPYRSTDKPV DLQRYAQTWA
VARKEIEAML GHPVRMEIEP GRFLVAESGY LVAEVRAVKQ VGRNTFVIID AGFNDLMRPA
MYGAYHGMTL LDADGQAVDR PRQPTVVAGP LCESGDVFTQ DDQALTPQDL PQAQVGDLLV
IHDAGAYGAS MSSNYNSRPL LPEFLIENGA LRMIRRRQTV QDLLSLEADF
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