Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2065 |
Symbol | |
ID | 1042833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2347791 |
End bp | 2350874 |
Gene Length | 3084 bp |
Protein Length | 1027 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145479 |
Product | acriflavin resistance protein |
Protein accession | NP_744215 |
Protein GI | 26988790 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.824615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.45428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTTTA CCGACGTCTT CGTGCGCCGC CCGGTGCTGG CGCTGGTGGT CAGCAGCCTG ATCATCCTGA TGGGGCTGTT TGCCATGGGC AAGTTGCCGA TCCGCCAGTA CCCGTTGCTG GAAAGCTCGA CCATTACCAT CAGCACCGAG TACCCCGGTG CCTCCGCCGA GTTGATGCAG GGTTTCGTGA CGCAGCCGAT CACCCAGGCA GTGTCGTCGG TCGAAGGCAT CGACTACCTG TCCTCGTCGT CGCAGCAGGG GCGCAGCCTG ATCACCTTGC GCATGGTGCT CAACCGCGAT TCGACCCAGG CGCTGGCCGA AACCATGGCC AAGGTCAACC AGGTGCGCTA TCGCCTGCCG GAAAAAGCCT ACGACCCGGT GGTGGAACTG TCGGCAGGTG ACTCCACCGC CGTGGCCTAT GTGGGGTTTG CCAGCGACAG CCTGTCGATA CCGGAACTGA GCGATTACCT GTCGCGGGTG GTGGAACCGC AGTTCTCCGG TATCGACGGC GTGGCCAAGG TGCAGTCGTT CGGCGGGCAG CGCCTGGCCA TGCGCCTGTG GTTGGACAGT GAGCAGATGG CCGGGCGCGG GGTGACGGCG GCGGACGTGG CGCAGGCGGT ACGTGCCAAC AACTACCAGG CAACGCCGGG CCAGGTGCGC GGGCAGTACG TGCTGGCCGA TATCCAGGTG GACACCGACC TGACCCGGGT CGAAGACTTC CGTGAGCTGA TCATCCGCAA CGATGGCACC GACCTGGTGC GCCTGCGCGA TATCGGCACC GTCGAGCTGA GTGCGGCGGC CACGCAGACC AGCGCCACCA TGGACGGCAA ACCTGCCGTG CACCTGGGGC TGTTCCCCAC GCCCAGCGGC AACCCACTGG TGATCGTCGA GGGTATTCGC CAACTGCTGC CACAGATCCA GCAGACCTTG CCGCCTGGCG TGTACGTGGC GCTGGCCTAT GAAACCGCAC GCTTCATCGA TGCGTCGATC CATGAAGTGC TGCGCACCTT GGTGGAGGCG ATGCTGATCG TGGTGTTGGT GATCTGGCTG TGCCTGGGTT CGCTGCGCAG CGTGCTGATC GCGGTGGTGG CCATTCCGCT GTCGATGCTG GGGGCTGCGG GCCTGATGTT GATGTTTGGT TTCAGCCTCA ACCTGCTGAC CTTGCTGGCG ATGGTGCTGG CCATCGGCCT GGTGGTGGAC GATGCCATTG TGGTGGTGGA AAACGTGCAC CGGCATATCG AGGAGGGCAA GTCGCCGATC GCGGCAGCAT TGGCCGGGGC GCGGGAAATT GCCGGGCCGG TGATCGCCAT GACCCTGACC CTGGCGGCGG TGTATGCGCC CATTGGCTTG ATGGGCGGGC TGACCGGCAC GCTGTTCCGT GAGTTTGCCT TGACCCTGGC GGGGGCGGTG ATCGTGTCCG GCATTGTGGC GCTGACCTTG TCGCCGGTGA TGAGCTCGCT GTTGCTGCAA CCCGGTCAGC AGCATGGGGC AATGGCCGCT ATCGCCGATC GGTTGTTTGG TACGCTGAGC GGGGTCTATG GACGGGTGCT GGCCTACACA CTGGCACACC GCTGGATCAG TGGCGGCGTG GCGTTGCTGG TGTGCCTGAG CCTGCCCTGG CTGTACCTGC TGCCACAGCG CGAGCTGGCG CCGCCCGAGG ACCAGGCGGC GGTGCTGACC GCCATCAAGT CGCCGCAGCA TGCCAGCCTC GAATACGCAG AACGCTTTGC GCTGAAGCTC GACCAGGTGA TGAAGTCCAT TGCCGAAACC ACCGACACCT GGATCATCAA CGGTACCGAC GGCCCGGCCG CCAGTTTCGG TGGCATCAAC CTCAGCGCCT GGCAGGCGCG CGAGCGTTCC GCCGCACAGG TGCAGGCGCA GTTGCAGCAG GCCGTTGCGG ATATCGAGGG CAGCAGCATC TTCGCCTTCC AGGTCGCGTC GCTGCCGGGC TCCAGCGGTG GCCTGCCGGT GCAGATGGTG CTGCGCAGCG CCCAGGATTA CCCCGAGCTG TTCCAGACCA TGGAAGTGCT CAAGCAACGC GCCCGCGACA GTGGCCTGTT CGCCGTGGTG GACAGCGACC TCGACTACAA CAACCCAGTG GTCAAGGTGC GCGTGGACCG GGCCAAGGCG GCGAGCCTGG GCATCAGCAT GCAGGCCATT GGTGAGTCGC TGGGGGTGCT GGTGGGCGAG CAGTACCTCA ACCGCTTTGC CCTGTTCGGG CGTTCTTATG ACGTGATCCC GCAGAGTATC CAGGACCAAC GCCTGACGCC TGCGGCGCTG AGCCGCCAGT ATGTGCGCGC CGAGGATGGC AGCCTGGTGC CGCTGGCCAC GTTGGTGCGC CTGGATATCG AAGTGGCACC CAACCGCCTG TTGCAGTTCG ATCAGCAGAA CGCCAGTACC CTGCAGGCGA TCCCGGCCCC GGGTGTATCG ATGGGCAACG CCGTGGCATT TCTGGAACAG CTCACCGCCG AGCTGCCACC GGGCTTCAGC CACGACTGGC AATCGGAATC GCGCCAGTAT GTGCAGGAGG GCTTTGCCTT GATGTGGGCA TTTCTCGCCG CCCTGGTGGT GATCTACCTG GTGCTGGCGG CGCAGTACGA AAGCCTGGTC GACCCCCTGA TCATTCTGGT GACCGTGCCG CTGTCGATCT GCGGTGCGCT GCTGCCGCTG GCGCTGGGCT GGGCCACGCT GAACATCTAC ACACAGATTG GCCTGGTGAC GCTGATCGGC CTGATCAGCA AGCACGGTAT CCTGATGGTG GCGTTCGCCA ACGAGATTCA GGTGCGCGAC AACCTCGATC GTGCTGCCGC CATTGTTCGT GCGGCGCAAA TACGCTTGCG GCCAGTGCTG ATGACCACGG CGGCGATGAC TTTTGGCGTG CTGCCACTGC TGTTCGCCAG CGGCGCCGGC GCCAACAGCC GTTTCGGGTT GGGGGTGGTG ATTGTGTGCG GGATGCTGGT GGGGACCTTG TTCACCTTGT TCGTGCTACC GACGATCTAC GCCTGGCTGG CACGCGATCA CCGGGTGAGC ACGGCGCGGG CGAGGCAGTT GGTCGAAGCT GAAAGGCAAC TGGGGGCGCT TTAG
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Protein sequence | MRFTDVFVRR PVLALVVSSL IILMGLFAMG KLPIRQYPLL ESSTITISTE YPGASAELMQ GFVTQPITQA VSSVEGIDYL SSSSQQGRSL ITLRMVLNRD STQALAETMA KVNQVRYRLP EKAYDPVVEL SAGDSTAVAY VGFASDSLSI PELSDYLSRV VEPQFSGIDG VAKVQSFGGQ RLAMRLWLDS EQMAGRGVTA ADVAQAVRAN NYQATPGQVR GQYVLADIQV DTDLTRVEDF RELIIRNDGT DLVRLRDIGT VELSAAATQT SATMDGKPAV HLGLFPTPSG NPLVIVEGIR QLLPQIQQTL PPGVYVALAY ETARFIDASI HEVLRTLVEA MLIVVLVIWL CLGSLRSVLI AVVAIPLSML GAAGLMLMFG FSLNLLTLLA MVLAIGLVVD DAIVVVENVH RHIEEGKSPI AAALAGAREI AGPVIAMTLT LAAVYAPIGL MGGLTGTLFR EFALTLAGAV IVSGIVALTL SPVMSSLLLQ PGQQHGAMAA IADRLFGTLS GVYGRVLAYT LAHRWISGGV ALLVCLSLPW LYLLPQRELA PPEDQAAVLT AIKSPQHASL EYAERFALKL DQVMKSIAET TDTWIINGTD GPAASFGGIN LSAWQARERS AAQVQAQLQQ AVADIEGSSI FAFQVASLPG SSGGLPVQMV LRSAQDYPEL FQTMEVLKQR ARDSGLFAVV DSDLDYNNPV VKVRVDRAKA ASLGISMQAI GESLGVLVGE QYLNRFALFG RSYDVIPQSI QDQRLTPAAL SRQYVRAEDG SLVPLATLVR LDIEVAPNRL LQFDQQNAST LQAIPAPGVS MGNAVAFLEQ LTAELPPGFS HDWQSESRQY VQEGFALMWA FLAALVVIYL VLAAQYESLV DPLIILVTVP LSICGALLPL ALGWATLNIY TQIGLVTLIG LISKHGILMV AFANEIQVRD NLDRAAAIVR AAQIRLRPVL MTTAAMTFGV LPLLFASGAG ANSRFGLGVV IVCGMLVGTL FTLFVLPTIY AWLARDHRVS TARARQLVEA ERQLGAL
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