| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2010 |
|---|
| Symbol | |
|---|
| ID | 1042969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2282060 |
|---|
| End bp | 2282605 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145424 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | NP_744160 |
|---|
| Protein GI | 26988735 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00709418 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCAT CCCCCCCCAC CACCCATTAC GCGCGCCTGT CCATCGCCCT GCATTGGCTG
ATGCTGGTGC TGCTGGCCGC TGTCTATGCA CTCATCGAAC TGCGTGGCCT GTTCCCCAAG
GACAGCGCCG AACGCAACCT GATGAAAGAC CTGCACTTCA TGCTCGGGCT CAGCGTGTTC
GTGCTGGTCT GGCTGCGCCT GGCCATGCGC CTGAGCCGCC CGACTCCGCC CATCGTGCCC
AAACCACCGG CCTGGCAGAC CGGCCTGGCG CACCTGATGC ACCTGGCACT GTACCTGATG
ATGATCGGCC TGCCGCTGGC CGGCTGGCTG ATCCTCAGTG CCGCCGACAA ACCGGTGCCG
TTCTTTGGCC TGGAGCTGCC ACACCTGATC GGCCCGAACC CGGACCAGGC CAAGTTCATC
AAAGGTTGGC ATGAGCGTAT TGGCAGCTGG GGCTACTGGC TGATCGGCTT GCATGCACTG
GCCGGGCTAT ACCATCACTA TGTGCAGCGC GACAACACGC TGTTGCGCAT GCTGCCTTAC
AAGTAA
|
|---|
| Protein sequence | MVSSPPTTHY ARLSIALHWL MLVLLAAVYA LIELRGLFPK DSAERNLMKD LHFMLGLSVF
VLVWLRLAMR LSRPTPPIVP KPPAWQTGLA HLMHLALYLM MIGLPLAGWL ILSAADKPVP
FFGLELPHLI GPNPDQAKFI KGWHERIGSW GYWLIGLHAL AGLYHHYVQR DNTLLRMLPY
K
|
|---|
| |