Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2001 |
Symbol | metZ |
ID | 1043012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2269195 |
End bp | 2270406 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145411 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | NP_744151 |
Protein GI | 26988726 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC AATGGGATGC CGGGCGACTG GACAGTGACC TCGAGGGTGT CGGTTTCGAC ACCCTGGCGG TACGCGCTGG CCAAAACCGT ACCCCGGAAG GCGAGCACAG CGAAGCGCTG TTCCTGACCT CCAGCTATGT GTTCCGCACG GCAGCCGATG CTGCTGCGCG CTTTGCCGGC GAAACGCCGG GCAACGTCTA CTCGCGCTAC ACCAACCCGT CGGTGCGTGC CTTCGAGGAG CGCCTGGCGG CCATGGAAGG TGCCGAACAG GCCGTGGGTA CGTCCACCGG CATGGCGGCG ATCCTGGCCG TGGTCATGTC GCTGTGCAGC GCCGGTGACC ATGTGCTGGT GTCGCAGAGC GTATTCGGCT CCACCATCAG CCTGTTCGAG AAGTACTTCA AGCGCTTTGG TGTAGAAGTG GACTACGTGC CACTGGTCGA CCTCACCGGT TGGGAAAAGG CCATCAAGGC CAACACCAAG CTGCTGATCG TCGAATCGCC CTCCAACCCG CTGGCCGAGT TGGTCGATAT CACCGCGCTC AGCGAAATCG CCCATGCTCA GGGTGCCATG CTGGTGGTGG ACAACTGTTT CAGTACCCCG GCGTTGCAGC AGCCGCTGAA GCTGGGTGCC GACATTGTGT TCCACTCGGC CACCAAGTTC ATCGACGGCC AGGGCCGCTG CATGGGCGGT GTGGTTGCCG GCCGTACTGA GCAAATGAAA GAAGTGGTGG GTTTCCTGCG AACCGCAGGT CCAACCCTCA GCCCGTTCAA CGCCTGGATC TTCACCAAGG GCCTGGAAAC GCTGCGCCTG CGTATGCGTG CGCACTGCGA AAGCGCTCAG GCCCTGGCCG AATGGCTGGA GCAGCAGGAC GGCGTGGAGA AGGTGCATTA CGCCGGCCTG CCCAGCCACC CGCAGCACGA ACTGGCCAAG CGCCAGATGA GCGGTTTTGG TGCAGTGGTC AGCTTTGAAG TCAAGGGGGG CAAAGAGGGC GCCTGGCGTT TCATCGACGC TACCCGAGTG ATTTCCATCA CGACCAACCT GGGTGACAGC AAAACCACCA TCGCTCATCC GGCGACCACC TCACACGGTC GTCTGTCGCC GCAGGAGCGT GAAGCGGCTG GTATCCGCGA CAGCCTGATC CGTGTTGCCG TGGGTCTGGA AGACGTGGCT GACCTGCAGG CTGACCTGGC GCGCGGGCTG GCGGCATTGT GA
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Protein sequence | MTDQWDAGRL DSDLEGVGFD TLAVRAGQNR TPEGEHSEAL FLTSSYVFRT AADAAARFAG ETPGNVYSRY TNPSVRAFEE RLAAMEGAEQ AVGTSTGMAA ILAVVMSLCS AGDHVLVSQS VFGSTISLFE KYFKRFGVEV DYVPLVDLTG WEKAIKANTK LLIVESPSNP LAELVDITAL SEIAHAQGAM LVVDNCFSTP ALQQPLKLGA DIVFHSATKF IDGQGRCMGG VVAGRTEQMK EVVGFLRTAG PTLSPFNAWI FTKGLETLRL RMRAHCESAQ ALAEWLEQQD GVEKVHYAGL PSHPQHELAK RQMSGFGAVV SFEVKGGKEG AWRFIDATRV ISITTNLGDS KTTIAHPATT SHGRLSPQER EAAGIRDSLI RVAVGLEDVA DLQADLARGL AAL
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