Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1979 |
Symbol | |
ID | 1043051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2242980 |
End bp | 2243861 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145390 |
Product | hydrolase, putative |
Protein accession | NP_744130 |
Protein GI | 26988705 |
COG category | [R] General function prediction only |
COG ID | [COG1647] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.708266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0224758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCC TGAGCTGGAT TCGCGGTGTC AATGGCACCT TGGGCCGCCT GGCCCCCGAG CATGTCGCGG GCAAGATGCG CCGAGCCTTC ATGACCCCGC GCAACCTGCC GCCGCGGGAT TGGGAGCTGC CTGTGCTGGC CAGCGCCGAG CGCATTACGC TGCGCTTCGG CCTGTCTGCC TTGCGCTGGG GTCAAGGGCC GACCGTGCTG CTGATGCACG GTTGGGAAGG GCGCCCGACG CAGTTTGCCG CCTTGATCGA GACCTTGGTT CAGGCGGGGC ATACGGTGGT GTCGCTGGAA GGGCCTGGGC ATGGTCGTTC GCCTGGCGAG CAAGCGAATG TGGTGCTGTT TGCCCGGGCG CTGCTTGAGG CTGCGGCTGA GTTGCCGCCC TTGCGTGCAG TCATTGGCCA TTCCATGGGT GGGGCAAGCG TGCTGCTGGC TTTGCAGATG GGGCTGCGCA CAGAGGCGGC TGTCAGCATT GCAGCGCCGG CGCGGTTGCT CGGTGTGTTG CGTGGTTTTG CCCATCGCCT GGGGCTGCCA GCACGGGCAC GGGCAGCGTT CATTCGCCAG ATCGAGCGCG ATGTGGGCAT GCAGATTGCG CGGCTGGATG TCACGGGGTA CCAGCTGGAG CTGCCGGGGC TGGTGGTGCA TGCTGCCGAT GATGCTCTCG TGCCCGCAGA TGAGGCACAT GTCATCCACA AGTCCTGGTT CGACAGCCGG CTGATGCTGC TGGAAGAGGG TGGTCACCAG CGAGTGCTGG CCGACCCGCG GCTAAGTGAA GCCGTGCTCG AATTGCTGGC TCGGGCTGAA GCGGTTAGTG TCGGGGCGGC TTCAGTCGCG AACATCGGTA TCGCCGCCGG TGCCATCCGC CGCGGTGTCT GA
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Protein sequence | MTTLSWIRGV NGTLGRLAPE HVAGKMRRAF MTPRNLPPRD WELPVLASAE RITLRFGLSA LRWGQGPTVL LMHGWEGRPT QFAALIETLV QAGHTVVSLE GPGHGRSPGE QANVVLFARA LLEAAAELPP LRAVIGHSMG GASVLLALQM GLRTEAAVSI AAPARLLGVL RGFAHRLGLP ARARAAFIRQ IERDVGMQIA RLDVTGYQLE LPGLVVHAAD DALVPADEAH VIHKSWFDSR LMLLEEGGHQ RVLADPRLSE AVLELLARAE AVSVGAASVA NIGIAAGAIR RGV
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