Gene PP_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1977 
SymbolgltX 
ID1043056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2239769 
End bp2241250 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content62% 
IMG OID637145382 
Productglutamyl-tRNA synthetase 
Protein accessionNP_744128 
Protein GI26988703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.182954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.011128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TACGCACGCG TATTGCGCCA TCGCCTACCG GCGACCCCCA TGTCGGCACT 
GCCTACATCG CCCTGTTCAA CTACTGCTTT GCCAAGCAGC ACGGCGGTGA GTTCATCCTG
CGCATCGAAG ACACCGATCA GCTGCGCTCC ACGCGTGAGT CGGAGCAACA GATCTTCGAC
GCCCTGCGCT GGCTTGGCAT CGAATGGAAC GAAGGCCCGG ATGTCGGCGG CCCGCACGGC
CCTTACCGGC AGAGCGAGCG TGGCGAAATC TACGCCAAAT ACGCCAAGGA ACTGGTAGAC
GCCGGCCACG CTTTCTACTG CTTCTGCACT GCCGAAGAGC TGGAGCAGAT GCGTGCCGAG
CAGCAGGCTC GCGGCGAAAC CCCGCGTTAC GATGGCCGTG CGTTGCTGAT GAGCGCCGAA
GAAGTGCAGC GCCGCCTGGA CGCTGGCGAG CCGCACGTGA TCCGCATGAA GGTGCCGAGC
GAAGGGATCT GCGTGGTGCC GGACATGCTG CGCGGCGATG TCGAGATCCC GTGGGACCGC
ATGGACATGC AGGTGCTGAT GAAGAACGAC GGCCTGCCGA CGTACTTCCT GGCCAACGTG
GTCGACGACC ACCTGATGGG CATCACCCAC GTGCTGCGTG GGGAAGAGTG GCTGCCATCG
GCGCCCAAGC TGATCAAACT GTACGAGTAC TTCGGCTGGG AGCAGCCCAA GCTGTGCTAC
ATGCCGCTGC TGCGCAACCC GGACAAATCG AAACTGTCCA AGCGCAAGAA CCCGACCTCG
GTCACCTTCT ACGAGCGCAT GGGCTTCATG CCTGAAGCGA TGCTCAACTA CCTTGGCCGC
ATGGGCTGGT CGATGCCTGA CGAGCGCGAG AAGTTCTCGC TGGCCGAAAT GGTCGAGCAC
TTCGACCTGT CACGTATCTC GCTGGGCGGC CCGATCTTCG ACATCGAGAA GCTGTCCTGG
CTCAACGGCC AGTGGCTGCG CGAGCTGCCG GTAGAGGAGT TTGCCGCACG CCTGCAGAAG
TGGGCGTTCA ACAGCGACTA CATGATGAAG ATTGCCCCGC ACGTGCAAGG CAGGGTCGAA
ACCTTCAGCC AGGTTGCCCC GTTGGGCGGG TTCTTCTTCG AAGGCGCGCT CAAGCTGGAC
GCCAAGCTGT TCGAAAGCAA GAAACTGTCG GCCGACCAGG TGCGCCAAGT GATCCAGCTG
ATCCTGTGGA AGCTTGAAAG CCTGCGTCAG TGGGAAAAAG AGCGCATCAC CGGTTGCATC
CAGGCTGTGG TCGAAGCGCT GGAACTGAAG CTGCGTGACG CCATGCCGCT GATGTTCGCC
GCCATCACGG GCCAGGCCAG CTCGGTTTCG GTGCTGGACG CCATGGAAAT CCTCGGCCCC
GACCTGACGC GCTACCGCCT GCGCCAGGCT CTGGACCTGC TGGGTGGGGT GTCGAAGAAA
GAAAACAAAG AGTGGGAAAA GCTGTTGGCT TCCATCGCCT GA
 
Protein sequence
MTTVRTRIAP SPTGDPHVGT AYIALFNYCF AKQHGGEFIL RIEDTDQLRS TRESEQQIFD 
ALRWLGIEWN EGPDVGGPHG PYRQSERGEI YAKYAKELVD AGHAFYCFCT AEELEQMRAE
QQARGETPRY DGRALLMSAE EVQRRLDAGE PHVIRMKVPS EGICVVPDML RGDVEIPWDR
MDMQVLMKND GLPTYFLANV VDDHLMGITH VLRGEEWLPS APKLIKLYEY FGWEQPKLCY
MPLLRNPDKS KLSKRKNPTS VTFYERMGFM PEAMLNYLGR MGWSMPDERE KFSLAEMVEH
FDLSRISLGG PIFDIEKLSW LNGQWLRELP VEEFAARLQK WAFNSDYMMK IAPHVQGRVE
TFSQVAPLGG FFFEGALKLD AKLFESKKLS ADQVRQVIQL ILWKLESLRQ WEKERITGCI
QAVVEALELK LRDAMPLMFA AITGQASSVS VLDAMEILGP DLTRYRLRQA LDLLGGVSKK
ENKEWEKLLA SIA