| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1972 |
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| Symbol | tyrB-1 |
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| ID | 1043062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2233406 |
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| End bp | 2234602 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145377 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | NP_744123 |
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| Protein GI | 26988698 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.45946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0035626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGT TTTCCGCTGT CGAGCTGGCA CCCCGCGACC CTATTCTGGG CCTCAACGAA
GCATTCAACG CCGACCCACG TACCGACAAG GTCAACCTGG GCGTAGGCGT GTATTGCAAT
GAGGAAGGCC GCATTCCGCT GCTGCGCGCC GTGATCGAAG CCGAAACCCA GCGTGCCGCC
CAGCACGCTT CGCGCGGCTA CCTGCCGATC GACGGCATCG CCACCTACGA CCAGGCTGTG
CAGAAGCTGC TGTTCGGCGC CGAGTCGCCA CTGCTGGCCG CCGGCCGCGT GGTCACCGTG
CAGGCCGTCG GTGGTACCGG CGCGCTGAAG ATCGGTGCCG ACTTCCTCAA GCGCCTCTCG
CCCAATGCCG TGGTTGCCAT CAGCGACCCT AGCTGGGAAA ACCACCGTGC GCTGTTCGAA
TCGGCCGGCT TCCCGGTGCA GACCTACCGC TACTACGATG CGCCGACCAA CGACGTCAAC
CGCGCTGGCA TGCTCGAAGA CCTCAACGCC CTGCCATCCG GTTCGATCGT GGTGCTGCAC
GCCTGCTGCC ACAACCCGAC CGGTGTCGAC CTGAACCTGG ACGACTGGAA GAACGTCCTG
GAAGTGGTCA AGGCCAAGGG CCACGTGCCG TTCCTCGACA TGGCCTACCA GGGCTTTGGT
GACGGTATCG CCGAAGACGC CTTCGCCGTG CGCCTGTTCG CCGAGTCGGG CCTGGAGTTC
TTCGTTTCCA GCTCGTTCTC CAAATCGTTC TCGCTGTACG GCGAGCGCGT CGGCGCACTG
TCGATCGTCA CCGCCTCCAA GGACGAGAGC ACCCGCGTGC TGTCGCAGGT CAAGCGCGTG
ATCCGCACCA CCTACTCCAA CCCGCCAACC CACGGCGCAA CCATTGTTGC CACCGTGCTG
AACAGCGCAG AACTGCGCCA GATGTGGGAA ACCGAACTGG CCGAAATGCG CGAGCGCATC
CACGGCATGC GCAAGCAGAT GGTATCGCTG CTGGCCGAAT ACGGTGCAAA CCGCGACTTC
AGCTTCGTTG GCCGCCAGGT CGGCATGTTC TCCTACTCGG GCCTGACCGT TGAACAGGTC
ACCCGCCTGA AGAACGACTT CGGCATCTAT GCCCTGGACA CCGGCCGTAT CGCGGTGGCC
GCGCTGAACC AGAGCAACAT CCACGTGGTG ACCAAAGCGA TCGTGGAAGT GCTGTAA
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| Protein sequence | MSLFSAVELA PRDPILGLNE AFNADPRTDK VNLGVGVYCN EEGRIPLLRA VIEAETQRAA
QHASRGYLPI DGIATYDQAV QKLLFGAESP LLAAGRVVTV QAVGGTGALK IGADFLKRLS
PNAVVAISDP SWENHRALFE SAGFPVQTYR YYDAPTNDVN RAGMLEDLNA LPSGSIVVLH
ACCHNPTGVD LNLDDWKNVL EVVKAKGHVP FLDMAYQGFG DGIAEDAFAV RLFAESGLEF
FVSSSFSKSF SLYGERVGAL SIVTASKDES TRVLSQVKRV IRTTYSNPPT HGATIVATVL
NSAELRQMWE TELAEMRERI HGMRKQMVSL LAEYGANRDF SFVGRQVGMF SYSGLTVEQV
TRLKNDFGIY ALDTGRIAVA ALNQSNIHVV TKAIVEVL
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