| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1908 |
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| Symbol | |
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| ID | 1043174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2152955 |
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| End bp | 2153944 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637145315 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | NP_744062 |
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| Protein GI | 26988637 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000305573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAGACG AATGGAAAGC TCCTGAGGCC GAGCCCGGGG AGCGCGAAGA GCGCAACAGC
TGGAAGCTGC TGGAAAAGAC CTTGCTGGCC AGCGTGCAGG AGCAGCGACG GTCGCGGCGC
TGGGGGATCT TCTTCAAGCT GCTGACCTTC GTCTACCTGT TCGGCATTCT GGCGTTGTTC
TCGCCGCTGA TGGACATGGA CAAGGCCGCT TCGCGCAGTG CCAGCCATAC CGCGCTGGTC
GAAGTGCGCG GGGTGATTGC CGATCAGGAG GCTGCCAGCG CCGATAACAT CGTCAAGAGC
CTGCGCGAAG CGTTCAAGGA CGACAAGACC AAGGCTGTGG TGATGCGCAT CAACAGCCCG
GGTGGCAGCC CGGTGCAGGC GGGTTACGTG TATGACGAAA TCCGCCGCCT GCGTGCCGAA
TATCCCGCCA TCAAGCTGTA TGCGGTGATC GCTGATCTTG GTGCTTCCGG TGCCTATTAC
ATCGCCAGTG CGGCAGACGA GATCTATGCC GACAAGGCCA GCCTGGTGGG GTCCATTGGG
GTGACGGCGG CGGGTTATGG CTTTGTTGGC ACCATGGAGA AGCTAGGGGT CGAGCGCCGA
GCCTATACAT CGGGTGAGCA CAAGGCGTTC CTTGATCCGT TTTCGCCGGA AAAACCAGAA
GAGACCCGTT TCTGGCAGGG TGTGCTGGAT ACCACGCACC GGCAGTTCAT CGCCATGGTC
AAGCAGGGGC GGGGTGAGCG CCTGAAGGAT AAGGAGCACC CGGAGTTGTT CAGCGGCCTG
ATCTGGTCGG GTGAGCAGGC CAAGGCGCTG GGGCTGGTGG ATGGCTTGGG CAGTGCCAGC
TATGTGGCGC GTGAGATCGT GGGCGAGAAG GAGTTGGTTG ACTTCACCGT TCAGGAGTCG
CCTTTCGATC GCTTCTCCAA GCGCGTGGGT GCCAGCGTGG CTGAGCACCT GGCGATGTGG
ATGGGGTTCC AGGGGCCGCA GTTGCGTTGA
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| Protein sequence | MADEWKAPEA EPGEREERNS WKLLEKTLLA SVQEQRRSRR WGIFFKLLTF VYLFGILALF
SPLMDMDKAA SRSASHTALV EVRGVIADQE AASADNIVKS LREAFKDDKT KAVVMRINSP
GGSPVQAGYV YDEIRRLRAE YPAIKLYAVI ADLGASGAYY IASAADEIYA DKASLVGSIG
VTAAGYGFVG TMEKLGVERR AYTSGEHKAF LDPFSPEKPE ETRFWQGVLD TTHRQFIAMV
KQGRGERLKD KEHPELFSGL IWSGEQAKAL GLVDGLGSAS YVAREIVGEK ELVDFTVQES
PFDRFSKRVG ASVAEHLAMW MGFQGPQLR
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