Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1872 |
Symbol | |
ID | 1043224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2095263 |
End bp | 2096474 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145275 |
Product | aminotransferase AlaT |
Protein accession | NP_744027 |
Protein GI | 26988602 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.866522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.490058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCAGTG CTCAAGCACG CCAAACGCCT GGAGGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC AACCCGGCGC CGTTTGGCTT CGAGGCGCCT GATGAAATCC TTCAGGATGT GATCCGCAAC CTGCCCACCG CACAGGGCTA CAGCGACTCC AAAGGCCTGT TCAGTGCCCG CAAGGCGGTG ATGCAGTACT GCCAGCAGAA AGATATCGAA GGCGTCACCA TCGAGGACAT CTACCTGGGT AATGGTGTGT CCGAGCTGAT CGTCATGTCG ATGCAGGCGC TGCTCAACAA CGGCGACGAA GTGCTGATCC CGGCCCCCGA CTACCCGCTG TGGACTGCCG CCGTGAGCCT GGCCGGCGGC AAGCCGGTGC ACTACCTGTG CGACGAGCAG GCCGACTGGT TCCCTGACCT TGAGGACATC AAGGCCAAGA TCACCCCGAA CACCAAGGCG CTGGTGATCA TCAACCCGAA CAACCCGACC GGCGCCGTCT ACTCCAAAGA ACTGCTGCTG GGCATGCTGG AGCTGGCCCG CCAGCACAAC CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTGT ACGACGAAGC CGTGCACATC AGCACCGCCT CGCTGGCTCC GGACCTGCTG TGCCTGACCT TCAACGGCTT GTCCAAGTCG TACCGGGTGG CGGGCTTCCG CTCTGGCTGG CTGATCATTT CCGGGCCCAA GCACCACGCA CACAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG GCCCAGCATG CCATCCAGAC CGCGCTGGGC GGCTACCAGA GCATCAACGA CCTGGTGCTG CCGCCGGGCC GCCTGCTGGA GCAGCGCAAC CGCACCTACG AACTGCTCAA CGACATCCCT GGCGTCAGCT GCGTGAAACC GATGGGCGCG CTGTATGCGT TCCCGCGGAT CGACCCGAAG GTTTGCCCGA TCCTCAACGA CGAGAAGTTC GCCCTTGACC TGCTGCTGTC GGAGAAGCTG CTGATCGTAC AAGGGACGGC GTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTGACC TTGCCGCGGG TGGATGACCT GGAAGCGGCA ATTGGCCGGA TCGGCAATTT CCTGAAGGGT TATTCGCAGT AG
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Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYCQQKDIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS YRVAGFRSGW LIISGPKHHA HSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLKG YSQ
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