Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1861 |
Symbol | |
ID | 1043238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2082277 |
End bp | 2083230 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637145264 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744016 |
Protein GI | 26988591 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.836857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG ATACCCTGAC CGACCAATTG AGCCTGTTCC TCGATGTGCT GGAAACCGGC AGCTTTTCTG CCGCCGCCCG TCGCCACCCG CTGACCCCGT CTGCGGTAGC ACGGCGCATC GACAACCTGG AAAGCGCCGT CGGCAGCCGC CTGTTCACCC GCAGCACCCA CGCAGTGCGG GCCACGCCTG CAGGCAACGC CTTTGCCGAG CGGGCCAGGC GCATCATCGA GGAGTTGCGC CTGGCCCGGG CTGAAGCGGT GTCACTGAGC AATGCCCCGG AAGGCCTGAT CCGCATCGAC GCCCCTGCCG CGTTTGGCCG CCGCCACCTG GCCCCGGCCA TTGCCGACTT CCTGGTGGCC TACCCGGGAC TGGACGTGCA ACTGCGGTTG ATCGACAGCT TTGTCGACCT GCAGGGCAGC CACCTGGGCG AGGTCGACCT GGTGCTGCGC GCCGGCCCCT TGGCCGACAC CCGCCTGGTC GCCACGCCGC TCGCCTACAT GGTGCGCATC GCCTGCGCCA GCCCCGCCTA CCTGGCCAGC CGCGGCATCC CCACCTGCCC CAGCGAACTG CCCGGGCATG ACGGGCTGGA CTGGGATGGC CTGGCGCCGC CGTTCGCCTG GCGCTTCAGT GTGGCCGGGC AAACCCGCCT GTACCGCCCC GCGCGCATGC GCATGGCCGC CAACAACGCC GAAACCCTGC TGTTCGGCGC CCTCGCCGGC CTGGGTATAG CCCACCTTCC CACTTGGCTG ATCAGTGAAT ACCTGCTGCG CGGCGAGCTG ATCCCGTTGT TCTGCGACGG CGGCTTGCCT GAAGCTGAGA CCAGCGGCAT TTACGCGCTA CGCCTGGCAC ATGAAACGAA CTCTCGCAGC CGTTTGCTGC TCGAATTCCT CAAGAGCCGC TTCAGCCCGA TTCCACCCTG GGACCTGGCC TTGCGCAGTG AATTGCGCGA TTAA
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Protein sequence | MSPDTLTDQL SLFLDVLETG SFSAAARRHP LTPSAVARRI DNLESAVGSR LFTRSTHAVR ATPAGNAFAE RARRIIEELR LARAEAVSLS NAPEGLIRID APAAFGRRHL APAIADFLVA YPGLDVQLRL IDSFVDLQGS HLGEVDLVLR AGPLADTRLV ATPLAYMVRI ACASPAYLAS RGIPTCPSEL PGHDGLDWDG LAPPFAWRFS VAGQTRLYRP ARMRMAANNA ETLLFGALAG LGIAHLPTWL ISEYLLRGEL IPLFCDGGLP EAETSGIYAL RLAHETNSRS RLLLEFLKSR FSPIPPWDLA LRSELRD
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