Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1819 |
Symbol | |
ID | 1043282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2044784 |
End bp | 2046724 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145221 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | NP_743974 |
Protein GI | 26988549 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCACGA GCAAGCACGG TGTGCTGGCC AACCTGGGCA TGGCCCGCAA ACTTGGCCTG GGCTTTGCCT TGGTGCTGCT GCTGACGCTG GCGGTCGCGG CCATCGGCGT CGTGGCGTTG CAAAGCGTTG GCCAGCGCTT CGACAGCTTG CGTCAGCTGG CCCAGTTCAA TACCGACTTA CTGCGCTTGC GCGAGCATGA GCAGGCGTTT GCCCTGCGCT CCGACATGCA GCAGGCCGAC GCTTTGCGTG GCGGCCTGCA GGGTTTGGTC GAACGCGCCC GAGGCCTGCC GGCGCTGGCA GCGGCACAAA CCGATCTCGC CGCCTATGGC CAGGCATTCG AAGCCTTTGT CGAGGCCGTG CAAGCCAAGG AGCTGGCGCT GGACATGGCC AGCTGGTCGG TGTCCAACGT GTCCAACAAC CTTGATGTGC TGCAGGCCGG CCTGGCCGAT GACGGCGTGT ACACCCTCAA GCAGTCCCAG GGCCAGCAGG GTGGCGAGTT TCTTGAGCAA GCCGCGCAGG TGGCCCAGGT GTCGCGGCTG ATGCTGCAGG CCATGGACGA AGCACGGGTA CGCCTGGAAA AAAGCCGCAA GGGCGAGGAG GGTGTGAGCC AGGAGCGTAT TGCCCAGACG GTGGAGGCCG CTGGCCTGGT CAGCCAGTTG CAAGGCGCGG TTGGCGATGC CGGTTACCAG AGTGTGTTGG GCGAAGTGGC GGGGCACATT GGCAGTTTTT CGGAAAAACT CAACGAATAC ACCGACCAGC TGGCCCGCGA GCAGGGGCTG AAGGCGCAGT TGCAAGCCAG CGCCGAGCGG GTTACCGGGC GTGTCGACCA AGCCTATCTT GGGCAGGAGC AGGCCCTGCA AGGCGAGCTG CAGCGCAATG CCATCGCCAT CGGCCTGGCC ACGGCGCTGG CGTTGCTTGT CGGCGTGTTG GCGGCCTGGC TGATTACCCG CGCTGTGGTC GGCCCGTTGA AGCATGTGAT CGCCCGCGCC CAGCGCATTG CGGCGGGTGA ACTGGGCTTC GACGCCCAGG CGCCGCGCCG GGATGAGGTG GGGCAACTGA TGCAGGCCAT GCAGCAGATG GCGGCGGGGC TCTCGGGCAT TGTCAGCGGC TTGCAGCAGG GTATCGAACA ATTGGCCGGC AGCGCCCAGG CGTTGTCGAC GGTGACCGAG CAGACCAACC GTGAGGTGGG CAGCCAGAAG GAGGAAACCG AACAGGTGGC GACCGCCATG CAGCAGATGA CTGCCACCGT GCACGATGTG GCGCGCAATG CCGAGGAGGC GGCGCAGGCA GCCCAGGCCG CGGACGAGAA GGTCGACACC GGCCAGCAGG TGGTGCGCCA GAGCATGCAG CGCATCGAGC AACTGGCGTC GGCGGCAGAA GCTGCCAGCG CCGGCATCGA CAGCCTCAGT GCCGAAATCC ACACCATTGG TGACGTGCTG GAAGTGATCA AGAGCGTGGC CGAGCAAACC AACCTGCTGG CGCTGAATGC CGCCATCGAG GCTGCCCGCG CCGGCGAGCA GGGGCGCGGC TTTGCCGTGG TGGCCGATGA AGTGCGCGCG CTGGCGCGGC GTACCCGGCA ATCCACCGAG CAGATCGAAA CCTTGGTGGC CAGCCTGCGC GGCAATGCCC AGCAGTCGGT GGCGCAGATC CGCGGCAGTA CCGAGCTGGT ACGGCTGGCC GTGGCCGATG CACTGCAGAC CGAAAGTGCG CTGGGCAGCA TTGCCGCAGC GGTGTCATTG ATTCAGCAGA TGAACCAGCA GATTGCCGCA GCCGCCGAGC AGCAGAGTTC GGTGGCGGAA GAGATCAGCC GCAGTGTCAC GCAGATTCGC GGCAGTGCGG ATCAGGCGGC ATTGGCGATG CAGGACAATG CCCGGTCCAG TGTCGAGCTG GCGCAGCTGG GCACCGATTT GAAGGGCATG GTGGGGCATT TCAGGTTGTA A
|
Protein sequence | MGTSKHGVLA NLGMARKLGL GFALVLLLTL AVAAIGVVAL QSVGQRFDSL RQLAQFNTDL LRLREHEQAF ALRSDMQQAD ALRGGLQGLV ERARGLPALA AAQTDLAAYG QAFEAFVEAV QAKELALDMA SWSVSNVSNN LDVLQAGLAD DGVYTLKQSQ GQQGGEFLEQ AAQVAQVSRL MLQAMDEARV RLEKSRKGEE GVSQERIAQT VEAAGLVSQL QGAVGDAGYQ SVLGEVAGHI GSFSEKLNEY TDQLAREQGL KAQLQASAER VTGRVDQAYL GQEQALQGEL QRNAIAIGLA TALALLVGVL AAWLITRAVV GPLKHVIARA QRIAAGELGF DAQAPRRDEV GQLMQAMQQM AAGLSGIVSG LQQGIEQLAG SAQALSTVTE QTNREVGSQK EETEQVATAM QQMTATVHDV ARNAEEAAQA AQAADEKVDT GQQVVRQSMQ RIEQLASAAE AASAGIDSLS AEIHTIGDVL EVIKSVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LARRTRQSTE QIETLVASLR GNAQQSVAQI RGSTELVRLA VADALQTESA LGSIAAAVSL IQQMNQQIAA AAEQQSSVAE EISRSVTQIR GSADQAALAM QDNARSSVEL AQLGTDLKGM VGHFRL
|
| |