| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1771 |
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| Symbol | cmk |
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| ID | 1043351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1978571 |
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| End bp | 1979257 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145174 |
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| Product | cytidylate kinase |
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| Protein accession | NP_743927 |
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| Protein GI | 26988502 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0283] Cytidylate kinase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00506628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0452484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATTCAA TGGCACCGGT TATCACCATC GACGGACCAA GCGGCTCGGG CAAGGGCACG
GTCGCCGGGC TGATTGCCCG CGAGCTGGGC TGGAAGCTGC TGGACTCCGG CGCGCTGTAT
CGCTTGCTGG CATTCAATGC CAGCAACCAC GGCGTCGACC TGACCAACGA AGAGCTGCTG
ACCAAGCTTG CCGCCCATCT GGATGTGCAG TTCATCGCTG CCGAGCCCGG TAAGCTACAA
CAGATCATCC TTGAGGGTGA GGACGTCAGC AACGTCATCC GTACCGAAAC CGTCGGTGCC
GGTGCATCGA TGGTGGCCTC GCTGCCGGCA GTGCGTGATG CGCTGCTGGT TCGTCAGCGT
GAGTTCCGCG AAGTGCCGGG GCTGATTGCT GATGGTCGCG ACATGGGTAC CGTGGTGTTC
CCGGATGCGC CATTGAAGGT CTTCCTCACC GCCAGCGCGG AGGAGCGCGC ACGTCGCCGC
TACCTGCAGT TGAAGGGCAA GGGTGAAGAT GTTAGTCTGT CGAGTCTGCT GGATGAGATT
CGTGCGCGTG ATGAGCGCGA CACCCAACGT GCAGTGGCCC CGCTGAAACC AGCGGCCGAT
GCCATTCAGT TGGACTCTAC CGAGTTATCC ATCGAGCAGG TGTTGCAACG TATCAGAAGC
GAGATCGCCC AGCGCGACCT TATCTGA
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| Protein sequence | MNSMAPVITI DGPSGSGKGT VAGLIARELG WKLLDSGALY RLLAFNASNH GVDLTNEELL
TKLAAHLDVQ FIAAEPGKLQ QIILEGEDVS NVIRTETVGA GASMVASLPA VRDALLVRQR
EFREVPGLIA DGRDMGTVVF PDAPLKVFLT ASAEERARRR YLQLKGKGED VSLSSLLDEI
RARDERDTQR AVAPLKPAAD AIQLDSTELS IEQVLQRIRS EIAQRDLI
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