| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1767 |
|---|
| Symbol | gyrA |
|---|
| ID | 1043356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1971069 |
|---|
| End bp | 1973840 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145170 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | NP_743923 |
|---|
| Protein GI | 26988498 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.159029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.697919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAACT GAGACAGTCT
TACCTCGACT ACGCGATGAG CGTGATTGTC GGGCGAGCGC TGCCCGATGC GCGTGACGGC
TTGAAGCCTG TGCATCGCCG CGTTCTCTAT GCGATGAGCG AACTGGGCAA CGACTGGAAC
AAGCCGTACA AGAAATCCGC CCGTGTGGTC GGTGACGTGA TCGGTAAGTA CCACCCGCAC
GGCGACACTG CGGTCTACGA CACCATCGTG CGTATGGCCC AGCCGTTCTC GTTGCGCTAC
CTGCTGGTCG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGACAACGC TGCTGCCATG
CGATACACCG AAGTGCGCAT GACCAAACTG GCCCACGAAC TGCTGGCCGA CCTGCACAAG
GAAACCGTCG ACTGGGTGCC CAACTACGAC GGCACCGAGC AGATCCCGGC GGTCATGCCG
ACGCGTATTC CCAACCTGCT GGTCAACGGT TCCAGCGGTA TTGCCGTGGG CATGGCGACC
AACATTCCGC CGCATAACCT AGGCGAGGTC ATCGATGGCT GCCTGGCGCT CATCGACAAC
CCGGAAGTCA CCATCGATGA GCTGATGCAG CACATCCCTG GCCCGGACTT CCCGACTGCC
GGCATCATCA ACGGTCGCCA GGGCATCATC GAGGCCTATC GCACCGGCCG TGGCCGCATC
TACATGCGCG CCCGCTCCGA GATCGAGGAC ATCGACAAGG TTGGCGGCCG CCAGCAGATC
GTGATCACCG AGCTGCCGTA CCAGCTGAAC AAGGCGCGCC TGATCGAAAA GATCGCCGAG
CTGGTCAAAG AGAAGAAGAT CGAAGGCATC ACCGAGCTGC GCGACGAGTC CGACAAGGAC
GGCATGCGCA TCGTCATCGA GCTGCGTCGC GGCGAGGTGC CGGAGGTGGT GCTGAACAAC
CTCTACCAGC AAACCCAGCT GCAGAGCGTA TTCGGCATCA ACGTGGTGGC CCTGGTCGAC
GGCCGTCCGC GCCTGCTCAA CCTCAAGGAC CTGCTCGAAG CGTTCGTCCG CCACCGCCGT
GAAGTGGTGA CCCGTCGTAC CGTATTCGAG CTGCGCAAGG CCCGTGAACG TGGCCATATC
CTTGAAGGCC AGGCGGTTGC GCTGTCCAAC ATCGACCCGG TCATTGCCCT GATCAAGGCC
TCGCCGACGC CGTCCGAAGC CAAGGAAGCC CTGGTCTCCA CGCCGTGGGA ATCCAGTGCC
GTGCAGGTCA TGGTCGAGCG CGCCGGCGCC GATTCCTGCC GCCCTGAGGA CCTGCCGGAG
CAGTACGGCC TGCACGACGG CAAGTACTTC CTGTCGCCGG AACAGGCCCA GGCCATTCTC
GACCTGCGCC TGCACCGCCT GACCGGCCTG GAGCACGAGA AGCTGCTGGC CGAGTACCAG
GAAATCCTCG AGCAGATTGG CGAGTTGATC CGCATCCTCA GCAGCGCCGA GCGCCTGATG
GAAGTGATTC GCGAGGAGCT GGAGGCCATT CGTGCCGAGT ACGGCGATGT GCGCCGCACC
GAAATCCTCA ATGCCAGCCA CGACCTCAAC TACGGCGACA TGATCCCGGA AGAAGAGCGT
GTGGTCACCA TCTCCCATGG TGGTTATGCC AAGACCCAGC CATTGTCCGC CTACCAGGCC
CAGCGCCGCG GCGGCAAAGG CAAGTCGGCG ACCGGCGTGA AGGACGAGGA CTACATCGAG
CACCTGCTGG TCGCCAACAG CCATGCCACC CTGTTGCTGT TCTCCAGCAA GGGCAAGGTT
TACTGGAAGA AGACCTACGA AATCCCCGAA GCGTCCCGCG CTGCCCGCGG TCGTCCGCTG
GTCAACCTGC TGCCGCTGGA GGAGGGTGAG CGCATCACCG CCATGCTGCA GATCGACCTC
GAAGCGCTGC AGCAGAACGC CGACCTCGAC GAAGAACTGG ACGAGGCTGA AGACACCGTG
CTCGAGGGTG AGCTGGTAGA GGCCGAGGAA GTCGACGAAG AAGACGGCGA CACCCCGGAG
TGGGTTGCAG AGCCGACCGG CGCGTACATC TTCATGGCGA CCGCTTCCGG TACCGTCAAG
AAGACCCCGC TGGTGCAGTT CGCCCGTCCG CGCTCCAACG GCCTGATTGC CCTGAAGCTG
AAGGAAGGCG ACACCCTGAT TGCCGCGGCC ATCACCGATG GCGCCAAGGA AGTCATGATG
TTCTCCGACG CTGGCAAGGT CATTCGCTTT GCCGAGAGCG TCGTGCGTGA AATGGGCCGC
AACGCCCGTG GTGTGCGCGG CATGAAGCTG GGCAAAGGCC AGCGGATCAT TTCGATGCTG
ATCCCGGAGT CCGGCTCGCA GATCCTCACC GCCTCCGAGC GTGGCTTTGG CAAGCGCACC
CCGCTGTCCA AGTTCCCGCG TCGCGGCCGC GGTGGCCAGG GTGTGATCGC CATGGGTACC
AAAGGGCGCA ACGGCCTGCT GATCGGGGCT ATCCAGGTGC AGGAAGGCGA GGAGATCATG
CTGATTTCCG ACCAGGGCAC GCTGGTTCGC ACCCGGGTTG GCGAGGTGTC CAGCCTGAGC
CGCAACACCC AGGGTGTTAC GCTGATCAAG CTGGCGGCCG ATGAGACACT GGTGGGCCTG
GAGCGTATCC AGGAGCCGTC CGAGGACGAA CTCGATGAAG TGATCGAGAC GGACGAGGAG
GGTGTCGAGG CTGTAGCGCC AGACAATGAA AATGAAGAAG CTGCAGGTGC CGACGAGGCC
CCGCAAGAGT AA
|
|---|
| Protein sequence | MGELAKEILP VNIEDELRQS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMSELGNDWN
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY LLVDGQGNFG SVDGDNAAAM
RYTEVRMTKL AHELLADLHK ETVDWVPNYD GTEQIPAVMP TRIPNLLVNG SSGIAVGMAT
NIPPHNLGEV IDGCLALIDN PEVTIDELMQ HIPGPDFPTA GIINGRQGII EAYRTGRGRI
YMRARSEIED IDKVGGRQQI VITELPYQLN KARLIEKIAE LVKEKKIEGI TELRDESDKD
GMRIVIELRR GEVPEVVLNN LYQQTQLQSV FGINVVALVD GRPRLLNLKD LLEAFVRHRR
EVVTRRTVFE LRKARERGHI LEGQAVALSN IDPVIALIKA SPTPSEAKEA LVSTPWESSA
VQVMVERAGA DSCRPEDLPE QYGLHDGKYF LSPEQAQAIL DLRLHRLTGL EHEKLLAEYQ
EILEQIGELI RILSSAERLM EVIREELEAI RAEYGDVRRT EILNASHDLN YGDMIPEEER
VVTISHGGYA KTQPLSAYQA QRRGGKGKSA TGVKDEDYIE HLLVANSHAT LLLFSSKGKV
YWKKTYEIPE ASRAARGRPL VNLLPLEEGE RITAMLQIDL EALQQNADLD EELDEAEDTV
LEGELVEAEE VDEEDGDTPE WVAEPTGAYI FMATASGTVK KTPLVQFARP RSNGLIALKL
KEGDTLIAAA ITDGAKEVMM FSDAGKVIRF AESVVREMGR NARGVRGMKL GKGQRIISML
IPESGSQILT ASERGFGKRT PLSKFPRRGR GGQGVIAMGT KGRNGLLIGA IQVQEGEEIM
LISDQGTLVR TRVGEVSSLS RNTQGVTLIK LAADETLVGL ERIQEPSEDE LDEVIETDEE
GVEAVAPDNE NEEAAGADEA PQE
|
|---|
| |