Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1760 |
Symbol | |
ID | 1043379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1961735 |
End bp | 1963567 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145163 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_743916 |
Protein GI | 26988491 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGATG TACCAGGGTC ACCCGACCCG GTACCGGGCA AGCCATACAC TGCGGGCGAT CGACTGAGCT GGGCGGAAAT CCGCCGCCTG GCCTTGCATC ACAAGAAAAA CCTCTGGTCC GCCAACCTCA TTGCGTTACT GGCGGCGTGT TGCAGTGTGC CCATTCCGCT GCTGCTGCCG CTGTTGGTGG ACGAAGTTCT GCTCGGCCAT GGCGATGCTG CGCTGAAGTG GATGAACCAT CTGCTGCCGT CCAGCTGGCA GGTGGCAGCC GGCTACATCG GCCTGATGCT GGCGCTCACC CTGTGCCTGC GCCTGGCTGC ACTGGCGTTC AACGTTATCC AGTCCAAGCT GTTCGCCGGG CTGGCCAAGG ACATCGTCTA CCGCCTGCGC ATCCGCCTGA TCGAGCGCCT CAAGCGTATT TCGCTGAAAG AGTACGAAAG CCTGGGCAGC GGCACGGTGA CCACCCACCT GGTCACCGAC CTGGACACCC TCGACAAGTT CGTTGGCGAA ACCCTCAGCC GCTTCCTGGT GGCCATGCTG ACACTGACCG GCACGGCGGC CATCCTGATC TGGATGCACT GGCAGCTGGC CTTGCTGATC TTGCTGTTCA ACCCGCTGGT GATCTACTTC ACCGTGCAGT TGGGCAAGCG CGTCAAGCAC CTGAAAAAGC TCGAAAACGA CAGCACCGCG CGCTTTACCC AGGCGCTAGC GGAAACCCTC GATGCCATCC AGGAAATCCG CGCCGGCAAC CGCCAGGGCT ACTTCCTTGG CCGCCTGGGC TTGCGTGCCC GCGAGGTGCG CGATTACGCC GTGGACTCGC AATGGAAAAG CGATGCCAGT GGCCGTGCCA GTGGCCTGCT GTTCCAGTTC GGCATCGACA TCTTCCGCGC GGCGGCCATG CTGACCGTGC TGTTTTCCGA CCTGTCGATC GGCCAGATGC TGGCGGTGTT CAGCTACCTG TGGTTCATGA TCGGTCCGGT GGAGCAACTG CTTAATCTGC AATATGCCTA CTACGCCGCA GGCGGTGCGC TGAGCCGCCT CAACGAGCTG CTGGCGCGTG CCGACGAGCC GCAATACCCG GCCGCCAGCG ACCCGTTCGC CGGGCGCGAA ACGGTGGGCA TTGAAGTGCG CGACCTGCGC TTTGCCTATG CCGACGAGCC GGTGCTCGAG CACCTCGACC TGTCCATCGC TGCGGGTGAG AAGGTGGCGA TTGTCGGTGC CAGCGGCGGC GGCAAGAGCA CGCTGGTGCA GCTACTGCTG GGCCTTTACA GCGCCCAGGC CGGGACCATC CGCTTTGGCG GGGCCAGCCT GCAGGAAATC GGCCTGGAAA CCCTGCGCGA GAACGTCGCG GTGGTGTTGC AGCACCCGTC GCTGTTCAAC GACAGCGTGC GGGCCAACCT GACCATGGGC CGCGACTGCA GCGATGATGC GTGCTGGCAG GCGCTGCGCA TCGCCCAGCT GGATGCCACC ATCGCCGCCT TGCCGCAGGG CCTGGACAGC GTGGTAGGGC GTTCAGGCGT GCGCTTGTCC GGTGGCCAGC GCCAGCGCCT GGCCATTGCC CGCATGGTAC TGGCTGAGCC CAAGGTGGTG ATCCTCGACG AGGCCACCTC AGCCCTGGAT GCCGCCACCG AGTACAACCT GCATCAGGCC TTGGCGTGCT TCCTCAGCGG CCGCACCACG CTGATCATCG CCCACCGCTT GTCGGCGGTG AAACAGGCCG ACCGGGTGCT GGTGTTCGAT GGCGGGCACG TGGCCGAAGA CGGCGACCAT CAGCAGCTGA TTGCCGAGGG TGGGTTATAC GCCAAGCTGT ATGGGCATCT GCAGCAGAGC TGA
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Protein sequence | MLDVPGSPDP VPGKPYTAGD RLSWAEIRRL ALHHKKNLWS ANLIALLAAC CSVPIPLLLP LLVDEVLLGH GDAALKWMNH LLPSSWQVAA GYIGLMLALT LCLRLAALAF NVIQSKLFAG LAKDIVYRLR IRLIERLKRI SLKEYESLGS GTVTTHLVTD LDTLDKFVGE TLSRFLVAML TLTGTAAILI WMHWQLALLI LLFNPLVIYF TVQLGKRVKH LKKLENDSTA RFTQALAETL DAIQEIRAGN RQGYFLGRLG LRAREVRDYA VDSQWKSDAS GRASGLLFQF GIDIFRAAAM LTVLFSDLSI GQMLAVFSYL WFMIGPVEQL LNLQYAYYAA GGALSRLNEL LARADEPQYP AASDPFAGRE TVGIEVRDLR FAYADEPVLE HLDLSIAAGE KVAIVGASGG GKSTLVQLLL GLYSAQAGTI RFGGASLQEI GLETLRENVA VVLQHPSLFN DSVRANLTMG RDCSDDACWQ ALRIAQLDAT IAALPQGLDS VVGRSGVRLS GGQRQRLAIA RMVLAEPKVV ILDEATSALD AATEYNLHQA LACFLSGRTT LIIAHRLSAV KQADRVLVFD GGHVAEDGDH QQLIAEGGLY AKLYGHLQQS
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