Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1736 |
Symbol | |
ID | 1043441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1935696 |
End bp | 1936844 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637145139 |
Product | patatin |
Protein accession | NP_743892 |
Protein GI | 26988467 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCAC CCCCGGTAAC CGGTCTCATC CTGTCTGGCG GCGGCGCCCG CGCCGCCTAC CAGGTCGGTG TGCTGGCGGG CATCGCCGAG TTGCTGCCCG CCGGCGCGGA CAACCCTTTT CCGGTCATCG TCGGCACCTC CGCCGGGGCC ATCAACGCCG TCACCCTGGC CAGTGGTGCG GTGCACTTCA ATGACGCCGT GCAGCGGCTC ACTGCCTTCT GGCAGAATTT CCGCAGCCAT CTGGTCATCC GCAGCGACTG GCCCGGGGTC GTGCGCCAGG CCAGCCGTTT CGTTGGCCAC AGCCTGCTGG GGCTGGGTGG CCAGGCCCCC GTGGCGTTGC TCGACAGCAG CCCGTTGCGC AGCCTGCTGC AAACGCACCT GAACCTGGAT GGCATCGGCC ACGCCTTGGC CGCCGAGCAA CTGCGCGCCG TGGCGGTGAC CGCCTTTGGC TACGAGTCTG GTCAGGCGGT GACCTTCTAC CAGGGCCGCG GCACCATCGA GGCCTGGCTG CGCCACCGGC GTATCGGCGT ACCCGCACCG TTGACCATCG ACCACCTGCT GGCCAGTGCG GCGATCCCGC TGCTGTTCGC CCCGGTGCAA CTGGGCGGCG AGTATTACGG CGACGGTGCA GTGCGCCAGT CGGCGCCGAT CAGCCCGGCC TTGCACCTGG GCGCCAGCCG GGTGCTGGTG GTCGGGGTCA GCGGAAACCC GCAGCGGCCA GCGCCACCTG TACCGCCCCA GCGTGTGTTC AGCGGGCAGC AGCCGAGCCT GGCGCAGATC GGCGGGCACA TGCTCAACAG TACGTTCATT GACAGCCTGG AAGGCGATAT CGAACTGCTG CAGCGCCTCA ACCACTTGAG CGGGCTGTTG CCGGCGCACC TGGATGCCCG GCGCCTGGGG CTGGCACCGA TCGACGTGCT GGTGGTGGCG CCCAGCCAGC CGCTGGATGA GATTGCCGCT CGGCACCGGC GCGAGTTGCC GGCGGCGTTG CGCCTGTTTT TACGTGGGCC GGGGGCAACG CGCACCAGCG GGGCGGGGGT GTTGAGCTAT TTGCTGTTTG AGGCCAGCTA TTGCAGTGAA CTGATCGAGT TGGGGCGCAA GGATGCCTTG GCCAAGAAGC GCGAGCTTTG CGAATTCCTG GGGATTTGA
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Protein sequence | MAPPPVTGLI LSGGGARAAY QVGVLAGIAE LLPAGADNPF PVIVGTSAGA INAVTLASGA VHFNDAVQRL TAFWQNFRSH LVIRSDWPGV VRQASRFVGH SLLGLGGQAP VALLDSSPLR SLLQTHLNLD GIGHALAAEQ LRAVAVTAFG YESGQAVTFY QGRGTIEAWL RHRRIGVPAP LTIDHLLASA AIPLLFAPVQ LGGEYYGDGA VRQSAPISPA LHLGASRVLV VGVSGNPQRP APPVPPQRVF SGQQPSLAQI GGHMLNSTFI DSLEGDIELL QRLNHLSGLL PAHLDARRLG LAPIDVLVVA PSQPLDEIAA RHRRELPAAL RLFLRGPGAT RTSGAGVLSY LLFEASYCSE LIELGRKDAL AKKRELCEFL GI
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