Gene PP_16SG details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_16SG 
Symbol 
ID1044736 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5311162 
End bp5312679 
Gene Length1518 bp 
Protein Length 
Translation table 
GC content54% 
IMG OID640695057 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0126603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCATGGCTC AGATTGAACG CTGGCGGCAG GCCTAACACA TGCAAGTCGA GCGGATGACG 
GGAGCTTGCT CCTTGATTCA GCGGCGGACG GGTGAGTAAT GCCTAGGAAT CTGCCTGGTA
GTGGGGGACA ACGTTTCGAA AGGAACGCTA ATACCGCATA CGTCCTACGG GAGAAAGCAG
GGGACCTTCG GGCCTTGCGC TATCAGATGA GCCTAGGTCG GATTAGCTAG TTGGTGGGGT
AATGGCTCAC CAAGGCGACG ATCCGTAACT GGTCTGAGAG GATGATCAGT CACACTGGAA
CTGAGACACG GTCCAGACTC CTACGGGAGG CAGCAGTGGG GAATATTGGA CAATGGGCGA
AAGCCTGATC CAGCCATGCC GCGTGTGTGA AGAAGGTCTT CGGATTGTAA AGCACTTTAA
GTTGGGAGGA AGGGCAGTAA GTTAATACCT TGCTGTTTTG ACGTTACCGA CAGAATAAGC
ACCGGCTAAC TCTGTGCCAG CAGCCGCGGT AATACAGAGG GTGCAAGCGT TAATCGGAAT
TACTGGGCGT AAAGCGCGCG TAGGTGGTTT GTTAAGTTGG ATGTGAAAGC CCCGGGCTCA
ACCTGGGAAC TGCATCCAAA ACTGGCAAGC TAGAGTACGG TAGAGGGTGG TGGAATTTCC
TGTGTAGCGG TGAAATGCGT AGATATAGGA AGGAACACCA GTGGCGAAGG CGACCACCTG
GACTGATACT GACACTGAGG TGCGAAAGCG TGGGGAGCAA ACAGGATTAG ATACCCTGGT
AGTCCACGCC GTAAACGATG TCAACTAGCC GTTGGAATCC TTGAGATTTT AGTGGCGCAG
CTAACGCATT AAGTTGACCG CCTGGGGAGT ACGGCCGCAA GGTTAAAACT CAAATGAATT
GACGGGGGCC CGCACAAGCG GTGGAGCATG TGGTTTAATT CGAAGCAACG CGAAGAACCT
TACCAGGCCT TGACATGCAG AGAACTTTCC AGAGATGGAT TGGTGCCTTC GGGAACTCTG
ACACAGGTGC TGCATGGCTG TCGTCAGCTC GTGTCGTGAG ATGTTGGGTT AAGTCCCGTA
ACGAGCGCAA CCCTTGTCCT TAGTTACCAG CACGTAATGG TGGGCACTCT AAGGAGACTG
CCGGTGACAA ACCGGAGGAA GGTGGGGATG ACGTCAAGTC ATCATGGCCC TTACGGCCTG
GGCTACACAC GTGCTACAAT GGTCGGTACA GAGGGTTGCC AAGCCGCGAG GTGGAGCTAA
TCTCACAAAA CCGATCGTAG TCCGGATCGC AGTCTGCAAC TCGACTGCGT GAAGTCGGAA
TCGCTAGTAA TCGCGAATCA GAATGTCGCG GTGAATACGT TCCCGGGCCT TGTACACACC
GCCCGTCACA CCATGGGAGT GGGTTGCACC AGAAGTAGCT AGTCTAACCT TCGGGGGGAC
GGTTACCACG GTGTGATTCA TGACTGGGGT GAAGTCGTAA CAAGGTAGCC GTAGGGGAAC
CTGCGGCTGG ATCACCTC
 
Protein sequence