| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1689 |
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| Symbol | |
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| ID | 1043739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1881294 |
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| End bp | 1882559 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145089 |
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| Product | aromatic hydrocarbon degradation protein |
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| Protein accession | NP_743846 |
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| Protein GI | 26988421 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.918972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.897129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TAATGCTCAA AACCTCCCTC GGCGTAGCCG TTGCGCTTGC TTCCAGCCAA
CTGTTCGCCA GCGGCTTCGC GCTCAACGAA CAGAGCATCA GCAGCATGGG GACAGGTTTC
GCGGGACGTT CTTCCTCTGC CGAAGATGCC AGTACCGTAT TCGGCAACCC GGCCGGCATG
TCCCGCCTCA AGCGCGAACA ATTCACCGTG GGCGGCGCTG CCGTCATCGC CAAAACCGAC
ATATCGGGCC CAGGCAGCAA CCTCGGGGGG GAAACCGATG GTGACATGGT GCCTGTCGTT
GGCGTACCCA TGGGTTACTA CGTAAAACCG ATCGATGACC ACTGGAGCGT CGGTTTCGGT
ATCTACGTAC CGTTCGGCCT GGTAACCGAC TATGGCAGCG ATGATGCCGC GCGTTACTGG
GGCAAGAAGA GCCACGTACA GGTTGTCACC TTCCAGCCGA CTGTCAGCTA TGCCTTCAAC
GACAAGGTCT CGATCGGTTT TGGCCCAACC ATCAACCGCA TCGAAGGCGA ACTGGGCTCT
AGCCTGATCA ACCCGTTCAC CCCGGGCCGC AACGACGGCG AAGTGAAGAT CAAGGGCGAC
GATACAGCCG TTGGCTACAA CATCGGCATC CTGGTACAGG CCACCGACCG CACCCGCGTA
GGCCTCACCT ACCACTCGAT GGTCGACTAC GAGCTCGAGG GCAAGACCCG TGTCAGCACC
CCGCTGATCG GGCCATTCAA CGGCAACAAG TTTGACGCCA GCCTGAAGAT CAAGACGCCA
GAATCCGTCG ACCTTTCGGT TACCCATGAG CTGGATGACC AGTGGACCCT GTACGCAGGC
AGCACCTGGA CGCGCTGGAG CCGCCTGGAA AACATCACCG TGCAAAACGA TGTCCCGGCG
CCACTGGCAG GTTCGGCGTT CCAGACCATC ACCGAAGAGC AGAACTGGCA TGACACCTGG
GCTCACGCCA TTGGTGCATC GTACAAGGTC AACAAGGAGT GGGTACTGCG TACCGGCTTC
ACCGTCGACC AGTCGCCAAC CAACAACCAC GACCGCTCGC CGCGCATCCC GACTGGCGAC
CGCCGGATTT TCAGCCTCGG GGCCGGCTGG AGCCCGAACG ACGACATGAC CATCGACGTC
GCGTACTCCT ACCTGTGGGA GGAAGACACC AAGGTCAATC AGGTCAGCGC AACCAAAGGC
AGCTACCAGG CCAAGTACGA GAACAGCGCT CACGGTATCG GTGCATCCCT CACCTACCGC
TTCTGA
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| Protein sequence | MKKVMLKTSL GVAVALASSQ LFASGFALNE QSISSMGTGF AGRSSSAEDA STVFGNPAGM
SRLKREQFTV GGAAVIAKTD ISGPGSNLGG ETDGDMVPVV GVPMGYYVKP IDDHWSVGFG
IYVPFGLVTD YGSDDAARYW GKKSHVQVVT FQPTVSYAFN DKVSIGFGPT INRIEGELGS
SLINPFTPGR NDGEVKIKGD DTAVGYNIGI LVQATDRTRV GLTYHSMVDY ELEGKTRVST
PLIGPFNGNK FDASLKIKTP ESVDLSVTHE LDDQWTLYAG STWTRWSRLE NITVQNDVPA
PLAGSAFQTI TEEQNWHDTW AHAIGASYKV NKEWVLRTGF TVDQSPTNNH DRSPRIPTGD
RRIFSLGAGW SPNDDMTIDV AYSYLWEEDT KVNQVSATKG SYQAKYENSA HGIGASLTYR
F
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