Gene PP_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1670 
Symbol 
ID1044207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1866279 
End bp1866812 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID637145070 
ProductNLP/P60 protein 
Protein accessionNP_743827 
Protein GI26988402 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAGA TGGCGCGCTT CGCATTTCTC TCCTTGGCAG CCTTGCTGGC TGCATGCTCC 
AGCCGTGCGC CTGCGCCGGC CCCTGTGGTA CAGCCGCAGG TTACCTATAG CCAGCCCAGT
CCTTCACCGA TTGCCGATGA CGTGCTGATT CGCGCCATTG GTCTGGTTGG CACGCCCTAT
CGTTGGGGGG GCAATACCCC GGACTCCGGC TTCGATTGCA GCGGCCTGAT CAAGTATGTG
TACCGTGATG CTGCTGGCAT CAGTCTGCCG CGCTCGACGC GAGAGATGAT TGTCATGCGC
GCACCCACGG TGGATGCCAG TTCGCTGCAG TCCGGTGACC TGGTGTTCTT CGCCACCAGT
GGCGGCTCGC AGGTCAGCCA TGCCGGCATC TATGTCGGGG ACGGGCGCTT CGTGCATGCA
CCTTCCACCG GTGGCACCGT GCGCCTGGAC TACCTGTCGA ACAGCTACTG GGCCAAGGCC
TACCTGCAGG CCAAGCGGGT GATTCCGCAA GGGCATCTGG CACAGAACCC TTGA
 
Protein sequence
MVKMARFAFL SLAALLAACS SRAPAPAPVV QPQVTYSQPS PSPIADDVLI RAIGLVGTPY 
RWGGNTPDSG FDCSGLIKYV YRDAAGISLP RSTREMIVMR APTVDASSLQ SGDLVFFATS
GGSQVSHAGI YVGDGRFVHA PSTGGTVRLD YLSNSYWAKA YLQAKRVIPQ GHLAQNP