| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1668 |
|---|
| Symbol | |
|---|
| ID | 1044214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1864663 |
|---|
| End bp | 1865370 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637145068 |
|---|
| Product | DNA replication initiation factor |
|---|
| Protein accession | NP_743825 |
|---|
| Protein GI | 26988400 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.617034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC CGATCCAGTT GCCCCTGGGT GTGCGCCTGC GCGATGACGC CACCTTCATC
AACTACTATC CGGGCGCCAA TGCTGCGGCA TTGGGTTACG TCGAGCGGCT ATGCGAAGCC
GACGCCGGCT GGACCGAGAG CCTTATCTAC CTGTGGGGCA AGCAGGGTGT TGGCCGTTCC
CACCTGCTGC AGGCCGCCAC CCATCGCTTC CAGCAACGTG GCGAGCCCGC TGTCTACCTG
CCGCTGGCGC AATTGCTCGA CCGTGGCGTA GAACTGCTCG ACTACCTGGC CCAGTACGAA
CTGGTGTGCA TCGACGATCT GCATGTGATC GCCGGCAAGG CGGATTGGGA AGAGGCCATG
TTCCACCTGT TCAACCGCCT GCGCGACAGC GGCCGACGCT TGCTGCTGGC TGCCTCGGCA
TCACCGCGTG AGCTGCCGAT CAAGCTGCCG GACCTGAAGT CGCGGTTGAC CCTGGCGCTG
GTGTTCCAGA TGCGTGGCCT GTCCGACGAA GACAAGCTGC GCGCCTTGCA GCTGCGAGCT
TCGCGCCGTG GCCTGCACCT GACCGACGAA GTCGGCCATT TCATCCTCAC CCGCGGCGCG
CGGAGCATGA GCGCGTTGTT CGACTTGCTA GAGCGCCTCG ATCAGGCGTC GCTGCAGGCC
CAACGCAAGC TCACCATTCC TTTTCTCAAG GAAACCCTCG GCTGGTAA
|
|---|
| Protein sequence | MKPPIQLPLG VRLRDDATFI NYYPGANAAA LGYVERLCEA DAGWTESLIY LWGKQGVGRS
HLLQAATHRF QQRGEPAVYL PLAQLLDRGV ELLDYLAQYE LVCIDDLHVI AGKADWEEAM
FHLFNRLRDS GRRLLLAASA SPRELPIKLP DLKSRLTLAL VFQMRGLSDE DKLRALQLRA
SRRGLHLTDE VGHFILTRGA RSMSALFDLL ERLDQASLQA QRKLTIPFLK ETLGW
|
|---|
| |